CI01000030_05012841_05025567


Basic Information

Item Value
gene id CI01000030_05012841_05025567
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 5012613 ~ 5026000 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_05012841_05025567.mRNA
TTATAAAAGAAACAAGTCGGGAATGTACTGAAAACCATTGTGTCCAAAACAAGCCTCCACAGAGCCAAGGATTTTAAGCGGTTCATGAACCCAGTAGGAATACCGTTCTCAAATTCCATCCAGGTTTCCCTGAAATGCTACGATCATTTCAAGCACTACAGTACGAACCATGAAGATTAAGACACAATGTGGTTTGCCAGTGGTTTTTAACCTCCGGTGATAAGTGAAATGGCTGGCTGTGCTTATATTGGCAGGCAGGGAGGAAAGAAAGCCCAGATAATCTCTCTCTGGTCAAGTGCCCGTGGCCCTGGCACTGTTTTCGGAGGCCACAGCTGCACAGATAAAGGGTTGGGCAAATATTGCACAATGAACGACAAACATAGAGCTTCCACAGTCTCCATTTCGAGCTTGACTATATGTGTGAACACTCAATGCCTGTCCTCCTCTACGTTCGGTTTCAATGCTCCCCCGTCCATATTTAATTGCCATTCTCGCCACCCCCCACCCGGCTCTCCGTTCACCCTGCACAGCCCAGAACCCCTGAAAAGCGGTGACAGTGCTCCTTTGTTCACCCCAGACCACTCCTCTCCCTCAGCGCCCCCATCCACCCTCCGTTCGGTTGACAGGCATGCCTGTACAAGCTCGGCAAAAACCGAGAGAGGGAAAGACAGCGTGAAAAACCATGAAAACCTCTTGAGATTACTAGTCCCAGTACTCACATTGACAAAACAGGGAGGCTTCGGCAGTGGTGCTAAACTAATTGAGTGGTCCCTTGGGGCCTTCAAGTTCATTGTCCACCATGTCTCAATTAAACATCCATCAAACTGGCATCTAGTACCAAATCTACCTTGCCTGAAACGGAGCCAGCAGGAATCCACCAACTCCACAGTTTTGCCTTCCCCTTTCACGGTCCATCTCAGCAATTTTACAAATAGTCCAGTAACAGTTATTTGCTTTCAGCTGTCAGAGGGGATCCTGGTTGTGTCTATCTACTTCGAATCCAAACTGCAAATCTTTAACAGCCCTCGGTCGTTCTCGCGCTTGGTTATCGATCGCAAAGTGGCTGTTCTTTGTCCAGTCCTAGGAGGAAGTGGTGTGAAATTATCCGTATATCCTTATTTTCTCGTGCTGTTAAGGAAAGATAGCGACTGCAATTGCAGCTCAAAAACATTCGTTCAAAACGGAGTCAATGGGTGTGACACTAGGGAGAACTCATGCCCATGGCCTCTCGCCCAAGCCGTGCAGTTCTCTACAGGGTCTCAGTGGCCTCCTATTCATGCGCAGACTTCTTTCTCCCTGGTCCATACATTGCTGAAGAGTTGGCCCCTCATATACTGCATACTGGCCCCCAACATTGCATACTGGCCCCTTGATTGTGCAGGGCAAGAGATGCAAGGGGAAAAAAACAGAAAAAGAGACAAAGTAGTGAAAAAAAAGAGCGAAAACAACTGGCAGGCATCCAGACTCATGGGGACTGCGTTGATCATTATGTCTAGCCTTCAGGTGTCTGAGCCGGCTGCGTTTTGGGGGGAGGTGTGGTTACCAAAGAAGCAGACAAAGAGAAACTCGTTCACCGGGATCAAGAAAGCGAAGAAGGGAGGGAGGCATTGCCCCAGAGAACAGGACAGACTGATTTTTTTACAGGTCCTAATTAAAAACATCTGAAGACCCTCAGACATCAAACAGTCTTGCAAGGTCTCATTGCAATGCATTGCAATCTAATTTCTAAACTCAGGTTTCTTGATAGCTCAGCTCTCAAGATGTTAAATTAATATTAATACAAGTATTATTTATATTTATGAGCTGCGTTTAAACATGCATATGGAAGTCTGCATATGATTAAAGAAGAAAAAACAAACACACAACTGCTTGACAGAGGTCACCGGCTGTCACAACTTTACAACACGTGTCAAATTTAACAAAAACAGACAAATTGCTGAAGATTTTCACATGGGATGATAATAAATCTTTGTATATTGAAAATAAAAATTTTATATTTTCAATATTTTTGAAATACAATTCTTGTTTTAAATTACTAACTGAACAGGTCAGTGGTTTTGATCTGATCTAGATCAGGCTGAAAATGTTTTATAACATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_05012841_05025567.mRNA True 2098 mRNA 0.45 8 5012613 5026000

Neighbor

gene id symbol gene type direction distance location
CI01000030_04965586_04966361 NA coding upstream 46219 4964805 ~ 4966394 (+)
CI01000030_04956344_04956706 NA coding upstream 55375 4956306 ~ 4957238 (+)
CI01000030_04822608_04834394 NA coding upstream 178213 4822608 ~ 4834400 (+)
CI01000030_04804199_04820916 KIF14 coding upstream 191347 4804199 ~ 4821266 (+)
CI01000030_04794796_04802874 DDX59 coding upstream 209681 4794642 ~ 4802932 (+)
CI01000030_05136652_05140919 NA coding downstream 110510 5136510 ~ 5141441 (+)
CI01000030_05209012_05215995 NA coding downstream 182795 5208795 ~ 5216398 (+)
CI01000030_05246572_05249806 NA coding downstream 220572 5246572 ~ 5250513 (+)
CI01000030_05294880_05297650 NA coding downstream 268677 5294677 ~ 5298226 (+)
CI01000030_05305204_05351489 DENND1B coding downstream 279204 5305204 ~ 5351489 (+)
G159978 NA non-coding upstream 10451 5001944 ~ 5002162 (+)
G160005 NA non-coding upstream 11317 5000839 ~ 5001296 (+)
G159934 NA non-coding upstream 119252 4893024 ~ 4893361 (+)
G159933 NA non-coding upstream 120865 4891515 ~ 4891748 (+)
G159923 NA non-coding upstream 139475 4872938 ~ 4873138 (+)
G160037 NA non-coding downstream 13835 5039835 ~ 5040127 (+)
G159960 NA non-coding downstream 19558 5045558 ~ 5080706 (+)
G160060 NA non-coding downstream 97070 5123070 ~ 5123366 (+)
G159988 NA non-coding downstream 257614 5283614 ~ 5286342 (+)
G159962 NA non-coding downstream 368937 5394937 ~ 5494438 (+)
G159816 NA other upstream 495506 4516778 ~ 4517381 (+)
G159685 NA other upstream 524087 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 1968840 3018776 ~ 3043773 (+)
G158416 NA other upstream 2398320 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 2730243 2277208 ~ 2282743 (+)
CI01000030_07200104_07202258 GCGA other downstream 2173935 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 2828085 7868292 ~ 7886228 (+)
G162088 NA other downstream 3211965 8237965 ~ 8239604 (+)
G161986 NA other downstream 3518582 8544582 ~ 8548325 (+)
G162137 NA other downstream 3542010 8568010 ~ 8571726 (+)

Expression


Co-expression Network