XLOC_008833 (ecel1)


Basic Information

Item Value
gene id XLOC_008833
gene name ecel1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 47008307 ~ 47075260 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017501
AAaactcaaacatacacacacacacacacagtcagagacGCACACAGGCACGCGCGCGCTTGAGCAGTGCGATCGCGCGCTCTGTCAATTctggactctctctctctctttctttctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcacacacacacacacacactcactcactccaccGTGCGGAACCCTCTGCCGCTCGCCAGTTCTTCTCTCCGCGTCTCCGGGACTTTTACTCCGCGCTTCAGATCAAAGCAAACCGCAGACAGACACAGGCTGGAGGAAAcctttgatctcagagctgagaAGGTCAAAGGTCATGACCTCATTTTGACCCTCTTTCGTCTGCTGTCGTGACCTCATGTTTCACACTTTCCCCAACAAGTCTCGTACGCAGGCGTCGGTCAGCATGGAGAAAACGTACTCGCTGACGGCCCATTACGACGACTTCCAGGAGATCAAATATGGCAGTCGCTACAGCAGCAGTACGCTGAGTAATGGCATGAGTCTGCATCTGGGCGGATCATTGGACCGCAGCCGCACCCGAAGTGGGCGGGACAAGTGTGTGGGTGGAGCCGGGCCGGTGAGCGGAGCTACAGCGAGGTGGAGCCGTCGTGAAATCTGCCTTCTGTCCGCACTGGTGTTTGCAGCAGGAATGTGTGTGATTCTGGGATGCATGTTAGCATTAAAGTTCCTGTCGCTCGATCGCAGGATTCTCAGTGTCGCCAGGATTGTGTGAAACGGCGTTCGCTTTTACGCGCCGCTAGATTCGTTCAGGGAAATATCGACCCCAGCGTTCAGCCCTGTCATGACTTCTACAGCTTTGCGTGTGGAGGATGGTTACGCAGACACGGGATACCAGAGGATAAACTGAGCTATGGGATTATCACTGCTATTGGAGAACAAAACCAGGACAAACTGCAGCGCCTCCTACAGGCACCGGTGCAGAGGAGAGAGCTCGAGAGTGCAGAGAGAAAGGTGAAAGAATTTTACCGCTCATGCATAAACATCAAAGAAATCGACCGTCTGGGGGCGGGGCCTATGACCGAGGTGATTGACAGCTGCGGTGGGTGGGATCTGTCTGGAGCTCCTCCTGGAGGGGCGGGGTGGGACAGTGGCTCCGCCCCCATCAGGCCAGATTTTAATGAGATGCTGTATAAGACGCAGGGAGTTTACAGCACATCTGTGTTCTTCTCTCTTACCGTCAGCGTAGACGACAAAAACTCTTCACGCAACGCCATACGGattgATCAGGAGGGTCTGACTCTTCCAGAAAGAACTCTGTATCTTGGACAAGATGAAGACAGTGTGAAGATTCTGGCGTCCTATAAAGCGCTGATGGAGAGACTGCTGAGCATGCTGGGAGCTCACAACGCCACGCTCAAATCCCGAGAGATTCTGGATCTGGAGACCAAACTGGCAAACATCACTGTCTCTGAGTATGAAGACCAAAGAAAAGACATCAGCAGCATGTATAACAGAATAACACTAAAACAACTGCAGAAAATGGCTCCAAGTTTCCACTGGAAGCGTCTGCTTGACCGCATCTTCAACGATAATTTCTCTGAGGAGGAGGAGATTGTGGTTTTGGCCACTGACTACATGCAAACGGTGTCGGACATCATCAAAACCACCTCTAAACGCGTCCTTCATAACTACATGCTGTGGCGTATGGTTGCGGCTCTGAGCGAGCATCTCTCCACAGCGTTCCGCAGCACCATCCACGAGTTTTCTCGAGAAATCGACGGCACCGAGCAGCAGCTGGATCTGGAGCGTCTGTGTCTCACGCAGGCCAACAAACACTTCGGCATGGCCCTCGGAGCGCTGTTCGTCCAGCAGCACTTCTCCTCCTCCAGCAGAGCCAAGGTGCAGGAGCTGGTGGAGGATATTAAACACTCTCTGGATGTGAGGCTGCAGGAGCTCGACTGGATGGATGAAGAAACCAAAGACGCCGCCAGAGGAAAGCTGCAGCACATGATGGTTATGACGGGTTATCCGGACTTCCTGTTAAAGCCTGAGCTTATCGACGAGGAATATGCGTTTGACGTGAACGAGAAAACGTACTTCAAGAACATCCTGAACAGCATCAAGTACAACATCAAACTCTCCATCAAGAAGATCCACAAAGAGGTGGACAAGACCACGTGGCTTCTTCCTCCACAGGCATTAAATGCGTATTacctgccaaacaaaaaccagaTGGTTTTTCCTGCAGGTATTCTTCAGCCGACTCTCTATGATCCAGAATTCCCTCAGTCACTGAATTATGGAGGAATCGGTGCGATTATTGGACACGAGCTCACACACGGATACGACGACTGGGGTGGACAGTATGATCGCTATGGCAACCTGAAGCAGTGGTGGACGGAGGAGTCGTACAGGAAGTTCCAGAAGAAGACGGAGTGTATCGTCAAACTGTACGACAACTTCACTGTGTACAACCAGAGGgttaaCGGGCGTCTGACTCTGGGTGAGAACATCGCTGATCTGGGTGGACTGAAGTTGTCTTATCATGCGTATCAGAAGTGGGTGCGTGAGCACGGGCCAGAGCGTCCACTGCCgggactcaaacacacacatgagcAGCTCTTCTTCATCGCCTTTGCTCagAACTGGTGTATGAAGAGAAGATCTCAGTCCATCTACCTGCAGCTGCTGACAGATAAACACGCACCTGAGCATTACAGGTACTGCATTCATCAATACACACGGCACTATTCCTGACCAATCCAAACGGTTTATTCAGAGACCGACTCATTGATCACGGCACTATAATGAGTGTGTTTATCAAATGTAATCGTTTCAATTAATCTTCACTCACATTTTTAAGTTTATAGATTGTATTATTGACTTTTCCACAGTTCTGATTTGGCATTTCAGTCTTTTGGGAGGGAAA

Function

symbol description
ecel1 Predicted to enable metal ion binding activity and metalloendopeptidase activity. Predicted to act upstream of or within neuropeptide signaling pathway and proteolysis.

GO: NA

KEGG:

id description
ko01002 Peptidases and inhibitors

Ensembl:

ensembl_id ENSDARG00000060549

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017501 True 2940 mRNA 0.51 19 47008307 47075260

Neighbor

gene id symbol gene type direction distance location
XLOC_008832 zgc:153039 coding upstream 95232 46853252 ~ 46913075 (+)
XLOC_008831 CR381579.4 coding upstream 202027 46801341 ~ 46806280 (+)
XLOC_008830 NA coding upstream 207123 46799469 ~ 46801184 (+)
XLOC_008829 CR381579.3 coding upstream 263118 46695492 ~ 46745189 (+)
XLOC_008828 NA coding upstream 345912 46661849 ~ 46662395 (+)
XLOC_008834 cep57 coding downstream 7903 47083163 ~ 47088424 (+)
XLOC_008835 gap43 coding downstream 86657 47161917 ~ 47176151 (+)
XLOC_008836 NA coding downstream 220784 47296044 ~ 47297545 (+)
XLOC_008837 CABZ01088337.1 coding downstream 247600 47322860 ~ 47322976 (+)
XLOC_008838 folr coding downstream 266596 47341856 ~ 47350232 (+)
XLOC_008463 BX663520.1 misc upstream 25756025 21252191 ~ 21252282 (+)
XLOC_008826 CABZ01044047.1 non-coding upstream 412727 46595466 ~ 46595580 (+)
XLOC_008846 CABZ01087560.1 non-coding downstream 534062 47609322 ~ 47614730 (+)
XLOC_008848 CU655829.1 non-coding downstream 646613 47721873 ~ 47725335 (+)
XLOC_008850 NA non-coding downstream 671641 47746901 ~ 47747895 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00009152 ecel1,LOC106613064,LOC102301938,LOC107684524 coding CM030126.1 CM030126.1 27461230 ~ 27477658 (+)