CI01000030_07967106_07968408 (NOL8)


Basic Information

Item Value
gene id CI01000030_07967106_07968408
gene name NOL8
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 7967106 ~ 7968584 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_07967106_07968408.mRNA
ATGAAGCGATTGTACATCGGCGGTCTCGGCCACACAGTGTCTGAGAAGGACCTCAAAGACAGATTTGGAAAATTTGGGGATGTGTCAGATGTAGAAATTATCACGAGGAAAGATGAGCACGGATCTCCTCTAAAGACATTTGGCTACATCAACATAAACATCACAGATGCTGAATACAAAAGATGTATAGGCATATTAAATAAATCCACATGGAAAGGTGGAACCTTGCTTATTCAGATGGCAAAGGAAAGTTTTCTACATAGACTTGCTGAAGAACGACAGCAACTGGCTGAAAAGACCATCACCCCAAAGATCGACCCTCAGGAGAAATTAGTGGACTCACTTAAAGCAGCTGGTGTTGAAAATTTTCACATGAAAGCTGCTGTTCCAGGAACAGAAATTCCTGGACATAAGGACTGGGTTGTGAGTAAATTTGGCAGGGTCCTTCCTGTCCTGAATCTCAAATGTAAAGGAAAGAACAAAATATCCTTTATGTGCTACTATTCTTGTGGTTTTAAGGAAGATTTATTTAAAAACTGCAGATATTCTTGCATGTGAAGAAGTGTTTTTTTGCTTGGTGGAAAACACTCATTGAGATGAGTCCATAATTTATAACCAGCAGTTGCATTTTCCAAACATTTTTACATTTAATTTTTTTATCTGTCATCTTATCTGCTCATATTTTTTTGTAGTGCAGTGTCATCTTTTTTCAAAGTTGTAGATCTGAGATCATA

Function

symbol description
nol8 Predicted to enable RNA binding activity. Predicted to be involved in protein localization to nucleolus. Predicted to be located in nucleus. Predicted to be active in nucleolus. Orthologous to human NOL8 (nucleolar protein 8).

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_07967106_07968408.mRNA True 734 mRNA 0.38 5 7967106 7968584

Neighbor

gene id symbol gene type direction distance location
CI01000030_07954583_07955459 NA coding upstream 10632 7954583 ~ 7956474 (+)
CI01000030_07924704_07945878 ECM2, OMD coding upstream 21167 7924704 ~ 7945939 (+)
CI01000030_07903607_07912664 IPPK coding upstream 53797 7903607 ~ 7913309 (+)
CI01000030_07899071_07899829 NA coding upstream 66786 7899071 ~ 7900320 (+)
CI01000030_07868597_07886123 NA coding upstream 80878 7868292 ~ 7886228 (+)
CI01000030_07968740_07975571 NOL8 coding downstream 92 7968676 ~ 7975721 (+)
CI01000030_07990330_08009606 NISCH coding downstream 21746 7990330 ~ 8010155 (+)
CI01000030_08047726_08057237 STAB1 coding downstream 79142 8047726 ~ 8057237 (+)
CI01000030_08133065_08140755 RBCK1 coding downstream 164481 8133065 ~ 8140998 (+)
CI01000030_08150901_08154024 GM7936 coding downstream 182317 8150901 ~ 8154024 (+)
G161954 NA non-coding upstream 93918 7859914 ~ 7873188 (+)
G161956 NA non-coding upstream 105418 7861182 ~ 7861688 (+)
G161953 NA non-coding upstream 108843 7855627 ~ 7858263 (+)
G161950 NA non-coding upstream 120349 7846196 ~ 7846757 (+)
G161949 NA non-coding upstream 121365 7845492 ~ 7845741 (+)
G161974 NA non-coding downstream 17972 7986556 ~ 7988149 (+)
G162015 NA non-coding downstream 19996 7988580 ~ 7989175 (+)
G161977 NA non-coding downstream 63766 8032350 ~ 8111022 (+)
CI01000030_08155452_08158318 RDH5 non-coding downstream 188252 8155452 ~ 8158709 (+)
CI01000030_08168074_08174577 NA non-coding downstream 200772 8167927 ~ 8174662 (+)
CI01000030_07200104_07202258 GCGA other upstream 764621 7200104 ~ 7202485 (+)
G159816 NA other upstream 3449999 4516778 ~ 4517381 (+)
G159685 NA other upstream 3478580 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 4923333 3018776 ~ 3043773 (+)
G162088 NA other downstream 269381 8237965 ~ 8239604 (+)
G161986 NA other downstream 575998 8544582 ~ 8548325 (+)
G162137 NA other downstream 599426 8568010 ~ 8571726 (+)
G162449 NA other downstream 1387819 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 2074209 10039358 ~ 10047210 (+)

Expression


Co-expression Network