XLOC_008845 (CABZ01087566.1)


Basic Information

Item Value
gene id XLOC_008845
gene name CABZ01087566.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 47582207 ~ 47583796 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017512
acacacacacacacacacacacacacacacacactctctctctctctctcaaacacacacacacacacacacacactcatattctCTCTCGCACATTTTATCCTTCTGCAGCGATTGACCCCGCCCCCAAGATTGACGGACAGCAGGCCTCCATGGTAACCGTGCAGGAGAACGTCACTCACCACTTCAGCTGCCAATCAGAAGGCTGGACCCGTGAAGCCCCACCCCTTCTCACCTGGTACCTGAACGGGGAGCGTCAGAGCGAGGTGACAGGCAGGCGGGGGGCGGGGCCGGGGGCTGGGCGTGATACGTCACCGCGGGAGCTGCGGTTCGGTTCTGAGCGGAACAGTTCGTTCACACTGAGGCCGCGGCGCGGGGACCGGGAGCTGGTGTGTGCGGCGCAGAACACTGCAGACGGAGAAACCTTCAACGCCACCGTCACGCTCAACGTACAGTtccAGCCGGAGATCCTGCGTGTAGACGCTCATTACAGCGAGACCTCGGACCCCGGACTCGCCCTCATCCTGTTTGCTTTGGTTCGCTCCAACCCCCCCGCCACCATCTCCTGGGTGGACCAGTCCGGTCAGCTGGTGGCAAACAGCTCTGACTTCCTGATCCTGGACTCGAGGAGCTTCCCCTGGCTGGCCAATCACAGCCTGCAGGTCACGCTCAGCAGCCTATCAGGAAACCTCTCGCTCAACGCTAGCAACAGCCTCGGCTCCGCCCACTCCAACCTCACGCTCACAGGTTGGTGTCGTTGTAAAGAGGACAGATGTTGGTCTGGAGCTGAAGCGAAAATAAACTGTGTCTTTACACATATgagaataataaatatacatctaTTATAATATCTGTCATTACAAGTGTATTTTACTAAACAAGTTCAGGCTAAAATCAACAGAAAAGCAAAGCTAAATATCTGAACTAATGATGATCCAAATTTGAAGTTGGTGTCTCAAAATGTCTGGGTGCAGTACCAGAGATGACCACCAGAGACCAGCAGTGTACACTGACGACCATTCATCTGATCAAGCATGACTgtacagaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttaatacagAGGTTGTTTCCCCGCGGCTCTCCTCACAGACAGACTGTAATGTGTTTGGACAGTGTGTGTTCTGCCCTGCAGCCGCTCTGCTATTTCTCCTGATGTTTCAGGGTTGATCTGATCCCAGCGCTGTTGCTATGGCAGAAATCACGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101186

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017512 True 1244 mRNA 0.54 2 47582207 47583796

Neighbor

gene id symbol gene type direction distance location
XLOC_008843 sik3 coding upstream 6802 47492838 ~ 47575405 (+)
XLOC_008844 sidt2 coding upstream 27320 47525073 ~ 47554887 (+)
XLOC_008842 phox2a coding upstream 132959 47440477 ~ 47449248 (+)
XLOC_008841 clpb coding upstream 160371 47418565 ~ 47421836 (+)
XLOC_008840 CLPB coding upstream 170400 47386939 ~ 47411807 (+)
XLOC_008846 CABZ01087560.1 coding downstream 25526 47609322 ~ 47614730 (+)
XLOC_008847 paf1 coding downstream 34425 47618221 ~ 47623452 (+)
XLOC_008848 CU655829.1 coding downstream 138077 47721873 ~ 47725335 (+)
XLOC_008849 stard10 coding downstream 162380 47746176 ~ 47774711 (+)
XLOC_008850 NA coding downstream 163105 47746901 ~ 47747895 (+)
XLOC_008463 BX663520.1 misc upstream 26329925 21252191 ~ 21252282 (+)
XLOC_008837 CABZ01088337.1 non-coding upstream 259231 47322860 ~ 47322976 (+)
XLOC_008836 NA non-coding upstream 284662 47296044 ~ 47297545 (+)
XLOC_008831 CR381579.4 non-coding upstream 775927 46801341 ~ 46806280 (+)
XLOC_008830 NA non-coding upstream 781023 46799469 ~ 46801184 (+)
XLOC_008829 CR381579.3 non-coding upstream 837018 46695492 ~ 46745189 (+)
XLOC_008851 CU633855.1 non-coding downstream 244923 47828719 ~ 47831416 (+)
XLOC_008853 NA non-coding downstream 267083 47850879 ~ 47852351 (+)

Expression


Co-expression Network