CI01000030_08555726_08559327 (MMYHEMB1)


Basic Information

Item Value
gene id CI01000030_08555726_08559327
gene name MMYHEMB1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8555379 ~ 8559397 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_08555726_08559327.mRNA
CTATAAAAGAGGCCGTCTGAAAGTTCCTCAAGACCTGACAGGGATCCATCCACGGTAAGATAAAGTTCACATACAAATGCATATTCTACAAACTATATTCTGCATTGATTCTTTGGACTTGTACACATTTTAAAATCTTGCAAAGAAGATTAGACACATTAAATATTTTATCAACTACTTCTTTATTTTCACAGATCATACATCACTTCTCTGTACTAGGGCACTGAAAAAAAGGTAAAAATGTGTTAAACATTTTTATGAATCTGCTGGCATTCACAGAAAAAGAACATGTTTCAGTGAAAATCATGATTTTTTTGTTGTTGTAACACTAACAGGAACTCGCTGTCATGGGAGATGGTGAAATGGAGTGTTTTGGCCCGGCGGCCATTTTTCTCCGGAAGCCAGAAAAGGAAAGGATTGAGGCTCAAAACACCCCGTTTGATGCCAAAACGGCCTACTTTTTGTCAGAACCCGAGAACATGTACCTGAAAGGTACTCTTGTTAGTAAAGAAGGTGGCAAGGCTACAGTCAAAACCCTGTGTGGGAAAACCCTCACAGAAAAGGAAGATGAAATCTTTCCCATGAACCCACCCAAGTTTGACAAAATTGAGCCCGCTGTGCTCTATAACCTCAAAGAGCATTACGCAGCATGGATGATCTACACCTACTCCGGCTTATTCTGTGTCACCATCAATCCCTACAAGTGGCTGCCCGTCGGAGAATCTGGTGCAGGAAAGACCGTCAACACCAAGCGTGTTTTCGCGACAATCGCAGTGTCTGGACAGAAGAAGGCAGAACCTGTCCCAGGCAAAATGCAGGGGTCGCTAGAGGATCAAATCATTGCTGCCAACCCTCTGCTGGAGGCTTATGGTAATGCCAAGACTGTGAGAAATGACAACTCCTCTCGTTTTAAAACAGTAGTCATGTCTTGGAAAGCGATTAACAGTGAATTTGATGCTTTAGAGACACCGCTTATCACCACCAACCCTTATGACTATCCAATGATCAGCCAGGGTGAAATCACTGTCAAGAGCATCAACGATGTGGAGGAGATCATTGCCACAGATACTGCTATTGATATTCTGGGTTTCAGTGCTGAAGAGAAAATAAGCATCTACAAGCTGACAGGAGCTGTGATGCATCACGGGAACATGAAGTTCAAGCAGAAGCAGAGAGAGGAGCAAGCTGAACCTGATGGCACTGAGGGTGTGCGCAAGTATGAGAGAAGAGTGAAGGAGCTTACTTACCAGACAGAGGAAGACAAGAAGAATGTGACCCGACTGCAGGATCTGGTCCAGCTGAAAGTGAAGGCCTACAAGTGTCAGGCTGAGGAAGCTGAGGAGCAGGCCAACACTCACCTGTCCAGGTACAGGAAGGTGCAGCATGAACTGGAAGAGGCTCAGGAGCGTGCTGACATCGCTGAGTCTCAGGTCAACAAGCTGAGAGCCAAGAGCCTTGATGCTGGGAAGGGCAAGGAAGCAACTGAGTAAAGCCTCAAGCCTAGATCACCACAGGAAGTAATCATAAAATATGATTACTTGCAATTGTTTGTCTGCTGTA
>TU184107
GTCAGGTAAAGAAACAATGCATAAGCTTTAATGCAATCAAAAACACAGTTTGCTACTTGTTATTGCTAGTTGGTGGCACCTGGTGTTAGGTAAATATTCTTCTGATAGGACAAACTAACAAAAAAAAAAAAATGGACTTTGAATTTCATGGGGTTCTTAAAACAGAAAACAGTAGTCATGTCTTGGAAAGCGATTAACAGTGAATTTGATGCTTTAGAGACACCGCTT

Function

NR:

description
Zgc:66156 protein, partial

GO: NA

KEGG:

id description
K10352 MYH9s; myosin heavy chain 9/10/11/14

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_08555726_08559327.mRNA False 1560 mRNA 0.45 11 8555379 8559397
TU184107 True 228 lncRNA 0.35 1 8557629 8557856

Neighbor

gene id symbol gene type direction distance location
CI01000030_08168074_08174577 NA coding upstream 380717 8167927 ~ 8174662 (+)
CI01000030_08159242_08166884 GLS2B coding upstream 388434 8159242 ~ 8166945 (+)
CI01000030_08155452_08158318 RDH5 coding upstream 396670 8155452 ~ 8158709 (+)
CI01000030_08150901_08154024 GM7936 coding upstream 401355 8150901 ~ 8154024 (+)
CI01000030_08133065_08140755 RBCK1 coding upstream 414381 8133065 ~ 8140998 (+)
CI01000030_08763819_08775586 NA coding downstream 204333 8763730 ~ 8775772 (+)
CI01000030_08837486_08838040 NA coding downstream 277824 8837221 ~ 8838451 (+)
CI01000030_08845484_08861801 NA coding downstream 286087 8845484 ~ 8861801 (+)
CI01000030_08862264_08875155 NA coding downstream 302867 8862264 ~ 8875155 (+)
CI01000030_08875265_08877569 NA coding downstream 315868 8875265 ~ 8877569 (+)
G162016 NA non-coding upstream 25628 8477767 ~ 8529751 (+)
G162009 NA non-coding upstream 76439 8469866 ~ 8478940 (+)
G161988 NA non-coding upstream 89095 8463777 ~ 8466284 (+)
G162117 NA non-coding upstream 103752 8450792 ~ 8451627 (+)
G162116 NA non-coding upstream 104709 8449923 ~ 8450670 (+)
G162138 NA non-coding downstream 3720 8563117 ~ 8564920 (+)
G162142 NA non-coding downstream 35421 8594818 ~ 8596250 (+)
G162143 NA non-coding downstream 36944 8596341 ~ 8596770 (+)
G162145 NA non-coding downstream 37737 8597134 ~ 8599811 (+)
G162150 NA non-coding downstream 46334 8605731 ~ 8605956 (+)
G161986 NA other upstream 7054 8544582 ~ 8548325 (+)
G162088 NA other upstream 315775 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 682607 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 1352894 7200104 ~ 7202485 (+)
G159816 NA other upstream 4038272 4516778 ~ 4517381 (+)
G162137 NA other downstream 8613 8568010 ~ 8571726 (+)
G162449 NA other downstream 797006 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 1483396 10039358 ~ 10047210 (+)
G162297 NA other downstream 1573902 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1932049 10471835 ~ 10511071 (+)

Expression


Co-expression Network