CI01000030_08763819_08775586


Basic Information

Item Value
gene id CI01000030_08763819_08775586
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8763730 ~ 8775772 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_08763819_08775586.mRNA
GCATATAAAGGTGACATGCCATCGTATGTACCATAGCACAAGGTTGCATGTCAGCGCTATCTATGGTCACATCATAATGACGTTGTGTTATGAATGAAGGAGGAGGAGGTATTTCAAAATACAGGCGGCAGAGAGGTTTGTCTGGTGCAGAGACAGATGAATATGAATCTGAGCCTGTGTCAGTGATGGAGGGAGATTCTGTTACTCTACACACTAATCTTACTGAAATACAAAATGATGATACAATTCTGTGGATGTTTGGACCTAAAGACTCTCTCATATCTCAAATAACGAGAAAGGCTGATTTCACTTCATTTTTTGTGACTGATGATGACGTGGGATTTAGAGGAAGATTGCAGGTGGATCAAAACACTGCATCTCTCACCATCAGAAGCACCAGAGTCAGACTCTCAGGACAATATAAACTGACCATCTCTAGAGAAAAGACTAGGTACAAGATATTTAATGTTACTGTCTTTGGTGTGGTTGGTGAGACAAATGGAGTGAAGTCAGTGTCAGTGATGGAGGGAAATTCTGTCACTCTAAACACTGATACTGAAATACATACAGATGATCTGATAGTGTGGAGGTTTGGAGATAAAGGCATCCTCCTAGCTAAAATTTATGTAGAGACTAATGAGACCTCATTAAATTATGCTGATGAGAATTTCAGAGACAGACTGAAGCTGGATCAGACTGGATCTCTGACCATCACAAACACCAGAACCACAGACTCTGGAGTTTATGAACTACAGATCAGAGGCAGTCAGAGCTCACACAAGACATTTTTCCTTTCTGTCAGTGATTCAGATCTGTCTCCATGGGCTGTAACAGGAATATGTGTTGTTTCTGTTTTTCTGACTGCGACTATAACTGCCTGTTGCTATCACCGGATAGCGGGCAAAGAGAAGAAAGTGTCAGTGACAGAGGGAGATTCTTTCACTCTATGCACTGATGTTACTAAACTACATAAAGATCATACGATACAGTGGTGGTATGAAGATGAAGACAATCTCATTGCTGAAATCAAAGGAGGAACCAGTAAGAAACATGATGTTGCTGATGAGAGATTCGGTGACAGACTGACGCTGAATGATAATACTGGATCTCTAACCATCAGAGACATCAGAACCATTCACTCTGGACTCTATAAACTAAAGATCAGCAGCAACACATGCGCCGGTTGCATCGTCCAATGCAAGAGATTCATTCTTACCGTAAATAATGAAGAGAAGATGCCAGTGAAGAAGGGAGAATCTGTCAACCTGAAGACTAATACGGAAATACAGAGAGATGATCAGATACTGTGGCTGTTGGGATATGAAAACACTATCATAGCTCAAATCAAAGGAGGGACTGGAGAGATCATTACAGATGATGTTGCTGATGAGAGATTCAGAGGCAGACTGGAGCTGAACAATAGGACTGGATCTCTGACCATCAAAAACTCTGAAACTGAAGACACTGAAGTCTATAAACTAAAGATCAGAAGTGATAAAGGAGCCACAAACAAGAGATTCAGAGTTGGTATCTATGATGAAGAGAGGGAAGTGTCAGGAAAGGAGGGAAAGACTATCATTCTAAACACTGATGATGAAATGCAGAAAAACGATCAGGTATGGTGGCTGTTTGGAGAAGAAAACTCTCTGATAGCTGAAATCAAAGGTGGGACCGGAGATATCATTACATATGGTGGTACTGGTGGGAGATTCAGAGACAGACTGAAGCTGGACAAGAAGACTGGATCTCTGACCATCACAAACATCAGGTCCACAGACGCTGGACTTTATCAAGTATGGATCAACAGAAGCAGCAGCAGAAAGAACAAGCATTTGAGATTCACTGTTTCATTCAGACGTGAGTATTTCAAGTCTTTCAATCTCATTAACAGCTTTTCTCCTTCACTTGCAACAGCTGTGCTTCCACCGACAAGGAACCTGGTAATTGTAGTCCCGGACCATGTGGCCATCTTAGTTTGTAGTCCCCATGCTGCAACCATCTAGATGGCACATACCTTCCCTCTATGACACACCCTCTCACGATGCCACAGCATGTATTTGAATGTCACCATTGTTGAGTTTTATATGCTGATTGTTTATATCTGTGAGTGGCACTGCAGTTAATAATTTTATGCTCACAATATGGTTTCATAATTTTTCAGTATGTCTGATTGTCAGGAATATCACATG

Function

NR:

description
Si:dkey-182g1.3 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_08763819_08775586.mRNA True 2189 mRNA 0.41 8 8763730 8775772

Neighbor

gene id symbol gene type direction distance location
CI01000030_08555726_08559327 MMYHEMB1 coding upstream 204333 8555379 ~ 8559397 (+)
CI01000030_08168074_08174577 NA coding upstream 589068 8167927 ~ 8174662 (+)
CI01000030_08159242_08166884 GLS2B coding upstream 596785 8159242 ~ 8166945 (+)
CI01000030_08155452_08158318 RDH5 coding upstream 605021 8155452 ~ 8158709 (+)
CI01000030_08150901_08154024 GM7936 coding upstream 609706 8150901 ~ 8154024 (+)
CI01000030_08837486_08838040 NA coding downstream 61449 8837221 ~ 8838451 (+)
CI01000030_08845484_08861801 NA coding downstream 69712 8845484 ~ 8861801 (+)
CI01000030_08862264_08875155 NA coding downstream 86492 8862264 ~ 8875155 (+)
CI01000030_08875265_08877569 NA coding downstream 99493 8875265 ~ 8877569 (+)
CI01000030_08889890_08899808 NA coding downstream 114118 8889890 ~ 8900680 (+)
G162208 NA non-coding upstream 19941 8743458 ~ 8743789 (+)
G162189 NA non-coding upstream 22416 8733587 ~ 8741314 (+)
G162199 NA non-coding upstream 30735 8732691 ~ 8732995 (+)
G162197 NA non-coding upstream 33368 8730065 ~ 8730362 (+)
G162194 NA non-coding upstream 34212 8728684 ~ 8729518 (+)
G162223 NA non-coding downstream 10356 8786128 ~ 8786927 (+)
G162230 NA non-coding downstream 24504 8800276 ~ 8800565 (+)
G162192 NA non-coding downstream 25475 8801247 ~ 8803792 (+)
G162232 NA non-coding downstream 29722 8805494 ~ 8805958 (+)
G162233 NA non-coding downstream 30896 8806668 ~ 8807177 (+)
G162137 NA other upstream 192004 8568010 ~ 8571726 (+)
G161986 NA other upstream 215405 8544582 ~ 8548325 (+)
G162088 NA other upstream 524126 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 890958 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 1561245 7200104 ~ 7202485 (+)
G162449 NA other downstream 580631 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 1267021 10039358 ~ 10047210 (+)
G162297 NA other downstream 1357527 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1715674 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1962809 10738087 ~ 10751548 (+)

Expression


Co-expression Network