CI01000030_08837486_08838040


Basic Information

Item Value
gene id CI01000030_08837486_08838040
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8837221 ~ 8838451 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_08837486_08838040.mRNA
TGATAAAAAGCAAGCTGCGATGAGCACTAAGATCCTCGAACAATCTGCCGACCATGACTATGATATATAGGTTAACACAATTAGTAAAAGAAAAGACTCTACGCCAACAACTCCGAGCAAGATTCCAGCTGGGAAAAAGAGCAAGACTACATTAAAGGAAAACAAGGTGTCTAACCTGACCATACTGGAAGCCATTCAGAGTTTGGAGAAGAACTTTAATGAGCAACTGACGCAACTTCGAGAGCAAGCTAAGCAGAGTAGCAGCATGATTGCTAGCCTATCGAAAGCCGTGCAGTTCAGTGCCGAAGAAGTTAAGGAATGCAAGGGGAAAGTCATCGAGCTAGAAAAGTGCAATGATCGTCTGTGCAAAGAAAATCAAGAGCTTAAAGAAAGAATCAGGGACCAGGAGAGATATAAGATGCAATGGTGTCTGAAACTGAAAGGTTTATCAGAAAGAAAGGACGAAAACGTAAGAACAGACGTCATACAACTGTTCAAGGAGATCGCCCCTGACATGGAACAGCGACAACTCGAAGAAGCAATTGATATTGCGCACAGAGTCGGACGAAAAGAAGACAACAGGAATAGACACGTAGTTGTGTTATTTGTCCGGAAACTTGTCAAGCAGGAGTTATGGCGTCACTGCAAGGATTCCCCGGTGTGCAGAGAGAAAGGTGTCCGCCTCACCGAGATGGCCCCGCTAGAGGATAGAGAGGCAAGGAAAAAACTGTGGCCGCAGATTGAACAGGCTCGTCGGGAGGGAAAGCGTGCCTACTACCGCGGACTGCACGGATACATAGAGGGTCGTCGAATTGGTTAAACGAAGGAAAGGTTTGATCTACTGACATTAGAGGTTGAAGGAATGTGTTAAGAGGACATGGGACTATTGTTGTATTTGCTAATCAGCGTAAATAGGCTTTGAACTAAGTTCTTAATATGTTTTTTTTTTTCTTTAGTTTCTTCATTTAAAATATCTCTGTTCAGCAATGTTCAATTGTTCAGTCTCAATTGCTTCATAAAACGTGAGGGGTCTAAAAGATTTAGTCAAAAGAAAAGCATTATGTTTATTTTATTAAGTCTGCTGGTGTTGCAGTTTGTTTTAATAGGTTTCCAGGTGATATAATCTCATACAGGACAGATAACCAAGGTCATTGGCTGATGGTGGTTTTAAAAATTGATGGTTGTTTTTTCATACTAACTAATGTGTATGGTCATAGAACTGTTGCCCAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_08837486_08838040.mRNA True 1231 mRNA 0.42 1 8837221 8838451

Neighbor

gene id symbol gene type direction distance location
CI01000030_08763819_08775586 NA coding upstream 61449 8763730 ~ 8775772 (+)
CI01000030_08555726_08559327 MMYHEMB1 coding upstream 277824 8555379 ~ 8559397 (+)
CI01000030_08168074_08174577 NA coding upstream 662559 8167927 ~ 8174662 (+)
CI01000030_08159242_08166884 GLS2B coding upstream 670276 8159242 ~ 8166945 (+)
CI01000030_08155452_08158318 RDH5 coding upstream 678512 8155452 ~ 8158709 (+)
CI01000030_08845484_08861801 NA coding downstream 7033 8845484 ~ 8861801 (+)
CI01000030_08862264_08875155 NA coding downstream 23813 8862264 ~ 8875155 (+)
CI01000030_08875265_08877569 NA coding downstream 36814 8875265 ~ 8877569 (+)
CI01000030_08889890_08899808 NA coding downstream 51439 8889890 ~ 8900680 (+)
CI01000030_08906500_08914084 NA coding downstream 68049 8906500 ~ 8914084 (+)
G162236 NA non-coding upstream 25766 8809324 ~ 8811455 (+)
G162233 NA non-coding upstream 30044 8806668 ~ 8807177 (+)
G162232 NA non-coding upstream 31263 8805494 ~ 8805958 (+)
G162192 NA non-coding upstream 33429 8801247 ~ 8803792 (+)
G162230 NA non-coding upstream 36656 8800276 ~ 8800565 (+)
G162186 NA non-coding downstream 26724 8865175 ~ 8930522 (+)
G162254 NA non-coding downstream 107671 8946122 ~ 8946337 (+)
G162255 NA non-coding downstream 108107 8946558 ~ 8947698 (+)
G162256 NA non-coding downstream 109407 8947858 ~ 8948340 (+)
G162257 NA non-coding downstream 111013 8949464 ~ 8949693 (+)
G162137 NA other upstream 265495 8568010 ~ 8571726 (+)
G161986 NA other upstream 288896 8544582 ~ 8548325 (+)
G162088 NA other upstream 597617 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 964449 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 1634736 7200104 ~ 7202485 (+)
G162449 NA other downstream 517952 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 1204342 10039358 ~ 10047210 (+)
G162297 NA other downstream 1294848 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1652995 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1900130 10738087 ~ 10751548 (+)

Expression


Co-expression Network