CI01000030_09065536_09066102


Basic Information

Item Value
gene id CI01000030_09065536_09066102
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9065138 ~ 9066149 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09065536_09066102.mRNA
CTATAAGTTAGTTTGCGTGTGTTTTGGCACCATGTGAATGTGCAACTAGTTGTCAGCGAGAGAAACCTGTTGGGGCGCGTGGCTGCAAGACGTAAATGAAGCAAATGGAGACACATCAAGGCTGTTGTGTTCAATAATGAGCTTCCACTGGGGCCGTTCGGTTAAGAAACAACAGCTGTAAGACACAGACCCTCACATTCAGACTCGCAATCCAATCAAAGAGGCATTTTGCAGGTTGAGGTGAACGTAGACGCCTGCCTTCCCATCATTCCTCGCATGGGCGTCCCAGGGGCGAGAGTCTCGCTCTCCGACGGTCCAGACGTGATGTGGAGAGCGAGCGTGAAGTCAAATTGACTTAAAGGTAAAAGTTGATTTTCCGTAGATTTGAAGCATTAGAGATGTCAGGTTCGGATAAGCCCAAACATTCCCCCGCATCGCCGGAGAGCAGGAACGGCTCATTATCCTGTTTTTCCGTACCTCGGGCCTGTCTGTTTACGCCGATAAGACTCCATTCTCCTCAATCTGGCAGGGGGATCTCCATCAAAAACACTCGGGGAACTGTATTGATGGTTGGGAGAGATTATGGATGCGGCCGCTCCGCTGAACTGACACGTCGTTTTGTACCCAGGGGCCCCTGGCTCGCCGCTCGATGTTTTGTTTTTGATCTGAAAGCCTGGATAAGAAATACACAGCTGCAGCTGGGGAATGTTGGAGATTTTTTTGTCTTTCCTACTTTGAAGATTGAGTTAAGATTCAGGGAAACAGAAACAGAACTCGCATCCAGAGGGAGAGACTTGAACTCTGGGCCTGAGAAACGGAGGTGGGCGTCCGAACCAGACGGTCTTCAGTCCGGCCCTGCAGCACAAGTCTCAGACGAGCTCATAAATGAACAATCATCTGGATCTTACAGTCTTCATGTTTTGTGTGATAAGGAGCATATTGTTATTCAAAATACACCGCTTTAGGGAAACTTTATAAGCATAAAACTATATGCACATAGCTTTACTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09065536_09066102.mRNA True 1012 mRNA 0.48 1 9065138 9066149

Neighbor

gene id symbol gene type direction distance location
CI01000030_08970358_08975052 NA coding upstream 90045 8969392 ~ 8975093 (+)
CI01000030_08951137_08953545 NA coding upstream 111475 8949978 ~ 8953663 (+)
CI01000030_08906500_08914084 NA coding upstream 151054 8906500 ~ 8914084 (+)
CI01000030_08889890_08899808 NA coding upstream 164458 8889890 ~ 8900680 (+)
CI01000030_08875265_08877569 NA coding upstream 187569 8875265 ~ 8877569 (+)
CI01000030_09086896_09146359 ASIC1, ASIC1B coding downstream 20747 9086896 ~ 9146359 (+)
CI01000030_09158208_09166948 SMARCD1.L, SMARCD1 coding downstream 92059 9158208 ~ 9168173 (+)
CI01000030_09169745_09175576 GPD1A, GPD1, GPD1B coding downstream 103500 9169649 ~ 9176231 (+)
CI01000030_09181881_09195357 NA coding downstream 115732 9181881 ~ 9196033 (+)
CI01000030_09214411_09224921 NA coding downstream 148131 9214280 ~ 9224941 (+)
G162202 NA non-coding upstream 25550 9031877 ~ 9039588 (+)
G162257 NA non-coding upstream 115445 8949464 ~ 8949693 (+)
G162256 NA non-coding upstream 116798 8947858 ~ 8948340 (+)
G162255 NA non-coding upstream 117440 8946558 ~ 8947698 (+)
G162254 NA non-coding upstream 118801 8946122 ~ 8946337 (+)
G162190 NA non-coding downstream 83557 9149706 ~ 9150384 (+)
G162389 NA non-coding downstream 134085 9200234 ~ 9242739 (+)
G162432 NA non-coding downstream 169415 9235564 ~ 9236563 (+)
G162438 NA non-coding downstream 215379 9281528 ~ 9281835 (+)
G162439 NA non-coding downstream 216709 9282858 ~ 9283089 (+)
G162137 NA other upstream 493412 8568010 ~ 8571726 (+)
G161986 NA other upstream 516813 8544582 ~ 8548325 (+)
G162088 NA other upstream 825534 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1192366 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 1862653 7200104 ~ 7202485 (+)
G162449 NA other downstream 290254 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 976644 10039358 ~ 10047210 (+)
G162297 NA other downstream 1067150 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1425297 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1672432 10738087 ~ 10751548 (+)

Expression


Co-expression Network