XLOC_008850



Basic Information


Item Value
gene id XLOC_008850
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 47746901 ~ 47747895 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00018802
TTCACTTGACATATGGCTGAAGTACAACACCTGAATAGTGTTGTTAGATGTGGGAACTGTAGTATAAGTGGAATTATTGGAAATAATGCACACCTGAGCCGCTATGAACCGCTTTACCAACTCAGGTGTGCATTATTTCCTAATAATTCAACAGATCATCATCGGTTATTCTTCACTAATTCTACTGGTATGTtgaatgctggattctgattggctgatggaccCTCTGAGGTGTGATGTTGTTTTCAGATAAGGAGTTTGAGGACGCCAGCTTGACGTATGTCTGAAATTcaacatctgaacagtgtctTTAGCTGTGGGAACTGTAGTATAAGTGGAATAGGGCAATTGGGAACTGTGGAATTATTAGAGAATAACGCACAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00018802 True 384 lncRNA 0.40 2 47746901 47747895

Neighbor


gene id symbol gene type direction distance location
XLOC_008848 CU655829.1 coding upstream 21566 47721873 ~ 47725335 (+)
XLOC_008847 paf1 coding upstream 123449 47618221 ~ 47623452 (+)
XLOC_008846 CABZ01087560.1 coding upstream 132171 47609322 ~ 47614730 (+)
XLOC_008845 CABZ01087566.1 coding upstream 163105 47582207 ~ 47583796 (+)
XLOC_008844 sidt2 coding upstream 192014 47525073 ~ 47554887 (+)
XLOC_008851 CU633855.1 coding downstream 80824 47828719 ~ 47831416 (+)
XLOC_008852 CU682604.1 coding downstream 90941 47838836 ~ 47875713 (+)
XLOC_008853 NA coding downstream 102984 47850879 ~ 47852351 (+)
XLOC_008854 NA coding downstream 109719 47857614 ~ 47858171 (+)
XLOC_008855 NA coding downstream 134075 47881970 ~ 47883643 (+)
XLOC_008463 BX663520.1 misc upstream 26494619 21252191 ~ 21252282 (+)
XLOC_008837 CABZ01088337.1 non-coding upstream 423925 47322860 ~ 47322976 (+)
XLOC_008836 NA non-coding upstream 449356 47296044 ~ 47297545 (+)
XLOC_008831 CR381579.4 non-coding upstream 940621 46801341 ~ 46806280 (+)
XLOC_008856 NA non-coding downstream 149357 47897252 ~ 47900007 (+)
XLOC_008843 sik3 coding upstream 171496 47492838 ~ 47575405 (+)

Expression



Co-expression Network