CI01000030_09308467_09315467


Basic Information

Item Value
gene id CI01000030_09308467_09315467
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9307812 ~ 9316060 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09308467_09315467.mRNA
ATTTAAATGACACTCCAGTGGGATAGAATGCATATGATTTTAGAATGATTTTTGTATGGAAATGTCAGGAAGTTTATAACAATACCAGTGCACACAGCCAAAGTGTTTGGTGATTTTACTAGGCCTACAAGTAAAACTGTGGTAATGCCTTATCAGACACCACTATCATCAAAATAACATTCAGAAAACTCTTACACTCTTCAAAGACAAGATAGCATATTATTCATTTTAATTTATTCTTTTTTTACAATAATTAAGAGTGCACAAAAAAAAAAAGCTTATTAAATTGTGATTTTATAGTAGTAACAATAAACTATATTTACCATGATAAATCTGAGCTGTTAACTGAGCTGAGATGTAACAGCCAGACAAGCAAAGAGAAAAGATGATCAGGTGGTGTTGGTTATGTTTTCACATAATCATTATTTGACCTGAATCACTGAACTCATTTAGAGCCCAATCTTAGATTTACATTATTGATTACAGCAGCACTGTGATTCTACAGCAGAAGATCAGCTTTTTCAATATAATCCAAAGGATTTCTGAAAAAAAAAAAAAAAAAAAAATCATTCTTATGGGCTCTAAATGAGTTCAGTGATTCAGGTCAAAAAGGATGTTGCAGTGCATTCTGGGTGCCACCAATCAAAATTCATCCATGGACATTTGGGCCACATTTGGGCCAAATCACCTTAAAGGAATCCGCATCTGTTCTGGAGCAGGCCCAGTGCTGGTCCAGATGAGCAAAAACAGATCTGTGCCTTTTGTGCCAAAAGACACCAGCCCAAGTCCGCTGAGCGAATCTGGCCCAGAACTTACGAAGCATCTGGGTTTTTGCTATCTGGATGTGTCTGGTGTTCATACAGACACAGTGTCTGTGATGGAGGGAGATTCCGTCACTCTACACATTAGTGTTAAAAAAACCCAACAAGAGAGAATTAAATGGTATTTTAATAACACTTGTGTAGCTCAAATTAATGGAGATCCCAGTAAGATCTGTGCAGATAATCAAAGTCATGATGATAATGAGAGATTCAGAGACAGACTGAAGCTGGATCATCAGACTGGATCTCTGACCATCACAAACATCAGAACCACAGATGCTGGAGTTTATCAACTGAAGATCATCAACAGCAGCAGTGACAGTGATGAGACCTTCAGTGTTTCTGTCCGTGATGTTCCTGCTGCTGAACTAGAAGAAGTGAAGAGAAAGTCAGTGAAGGAGGGGGAATCTGTTACTTTAGATCCTGGTGTAGTAAAACACCCAAATGATGTGATGATGTGGTATTTTAATGATACTTGCATCGCTGAAATCACTGGAGATCTCAGTAAGATCTGCACGGATGATCAGTGTGAACACGCTGATGGACGATTCAAAAACAGACTGAAGGAGCATCATGTTGAATACTTGTCCACTAATAAGGCTGAGATTTCATTGTTGACTGTTGCCAGTGAATCGTCCCCTTATCCGGCTGAGACTGCCAGAGCGACATCACCTTTTTTAGCTATTTAAATAAATGAAAGCATGTAGCCAAAATCTATTTTTTGAAAGAAGCACATTATCAGCAATAGAACAGTGAATGCTTGATGTTTTTCTGTAGAGGTGTGTTAATGATGCTAAAAGAATTTTTTTTTTTTTTTTTTTTTTTTAGCAGTTTAGTACCTCCTTCCTTATGGCCAAGAAGTGTATTTTATTACTCTCACACAGTGTCATACTGCAATATGCAAGCATGCAAATCATGTGCACAAATATGCAAATAAGTCAAACAATATAAACTGACTCTGCACTACTGATAAAACTGCTGGAAAAGACTGATATTTGTCATGGATTCAGCCAGCATGCCTTCAGCATCAGGTCCTTCAGCTCCACCCACCGGAATATTAACCTGCCACACCCTCATCCAGCACCCATCAAAAGCACACAGCACATGCTTACCTGTTGTCTGGTCTTGTCAGTCTCTGCAAAAGAATGTTCATCATCTGTGTGCTCATCTAACCATCCTGCAAAGAAACAAAGACTCCTCAGTTAAGTGTTACCGCTCATTGAACTCCTTATGTTCATCACTTGCCTGCTTGATGGTCCTGCACAATCTAAACTATCTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09308467_09315467.mRNA True 2103 mRNA 0.39 4 9307812 9316060

Neighbor

gene id symbol gene type direction distance location
CI01000030_09300172_09306760 NA coding upstream 438 9299805 ~ 9307374 (+)
CI01000030_09259092_09261043 NA coding upstream 46769 9258216 ~ 9261043 (+)
CI01000030_09241979_09249271 NA coding upstream 58527 9241637 ~ 9249285 (+)
CI01000030_09214411_09224921 NA coding upstream 82871 9214280 ~ 9224941 (+)
CI01000030_09181881_09195357 NA coding upstream 111779 9181881 ~ 9196033 (+)
CI01000030_09321409_09339033 NA coding downstream 5280 9321340 ~ 9339964 (+)
CI01000030_09361364_09379014 NA coding downstream 44975 9361035 ~ 9379721 (+)
CI01000030_09509234_09514703 NA coding downstream 192529 9508589 ~ 9516002 (+)
CI01000030_09526436_09552770 NA coding downstream 210195 9526255 ~ 9554552 (+)
CI01000030_09598376_09634083 NA coding downstream 282094 9598154 ~ 9634480 (+)
G162441 NA non-coding upstream 23201 9284384 ~ 9284611 (+)
G162439 NA non-coding upstream 24723 9282858 ~ 9283089 (+)
G162438 NA non-coding upstream 25977 9281528 ~ 9281835 (+)
G162389 NA non-coding upstream 65073 9200234 ~ 9242739 (+)
G162318 NA non-coding downstream 15386 9331446 ~ 9333904 (+)
G162449 NA non-coding downstream 40698 9356403 ~ 9357014 (+)
G162452 NA non-coding downstream 66218 9382278 ~ 9382506 (+)
G162454 NA non-coding downstream 73080 9389140 ~ 9389367 (+)
G162137 NA other upstream 736086 8568010 ~ 8571726 (+)
G161986 NA other upstream 759487 8544582 ~ 8548325 (+)
G162088 NA other upstream 1068208 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1435040 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 2105327 7200104 ~ 7202485 (+)
CI01000030_10039688_10047019 NA other downstream 726733 10039358 ~ 10047210 (+)
G162297 NA other downstream 817239 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1175386 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1422521 10738087 ~ 10751548 (+)

Expression


Co-expression Network