CI01000030_09321409_09339033


Basic Information

Item Value
gene id CI01000030_09321409_09339033
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9321340 ~ 9339964 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09321409_09339033.mRNA
CCATAAAAAGTTATTAGAAGAAGAAGCAGCAGGAGCAACTTTCGTCAGTTTAATGCAGATTATGTGAAAATGTTTCGATTAATTTTGTTCTCGGTGTTATTGCTTTTATTCGACCCAGGTATTTTTGATGATATTGTCAGTGTGTCAGTGATGGAGGGAGATCTAGTCACACTACACACTGGTGTTCACTCACACGAACAAGATGATATTAAATGGTATTTTAATAAAATTCGCATAGCTGAAATCAATGGAGATCTCAGTAAAGCCTGTACAGATGTTCAGTGTAATGAAGGTACTGAGAGATTCAGAGACAGACTGAAGCTGGATGAGACTGGATCTCTGACCATCATGAACACCAGAAACACAGACTCTGGAGTTTATCGACTAAAACTCATCAACCGCATCATCAGAGAAAAGATCTTCAATGTTACTGTTCATGACAACGGGACGCAGCAAGGTGATCAGATGCAGCAGATCCCGACTGCAGCAACAATCAACAGAGATCCAGCGGCAGCAACAGAGATCAGCACTATCTGAGAGTCTGAGACTGGATGAAGTGAAGGACAGTGTGTTGTGATGATAAAGAGAGACAGTCAATGAATAAGTGCATAAACACTAATATCAGCGCTGTCGTACCTGCACATGTGTGACAGAGTTGAGTGATGTCCAGATGTTGAGTCTGGTTGCTGATGGGATTGTTCAGCACACAGCTGTAGGTGTTTTTATCCTGATATTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGGGTATTTCATTAAGATCAGAGTTTAGAGTGACAGAATCTCCCTCCGTCACTGACACTGACTGTATTTCATTTGTTTGGGCTCGAAGCGCACCTGAAGAACATGAAGAGAGACAGATTAAAGCTCTTGTTGATTTACAAAGCCTGAAATCAGGTGTAGATTGAATATTTTAAATATGAACTGAAGAACATCCAGAGATGCAAAAGCAAATGATTACATGATGATAATTACAGTTTGACAGTACAAGTTTAATTCTGCTGGATATATTCAATAGATTTTTTGAGAAATTGCTGGGAAGAATTTGCATTTGAAATCTTTGAAATTATGATACTGAAAAAAAAGTCTGATATTTGAAAGCGGTTCAATTGAGGCTTTGGATTACTGAGCCAGTGAAATTTATAGTCGCAATAGAAAGCCTGGAAATTTACATTCAAAATTCCAGTTAAACACAGAGACCTGGATTCACAGTATGTAAATCTCATGATATTGATCTGGTACATATAAAAGTAAGAAATAATGTGAACTGAACTGTAGTAGCAGCTTTAATACCCTGAAACTCAAAGAAATTAAACCATGAAAATGTTTTTTTTTTTTAACTTACCCATCAAACTCCAGCAGCACAAACAAA
>TU184403
CGCAAGTGTCAAGGAAGTACAGAAGGTGAGTATTACATACAGCTGATTTAACAAGATGGAGATTGTGTGTAAAGAATATTTGAAAGATGCAAAAATATGTATATTTATTGTGATTAACCAAAGCTGTTTAATTGAGTTTGTATTTTTGTTCAAACAGACAACGGGACGCAGCAAGGTGATCAGGTAAGATACTAAAGCCCCATTCAGATTGTCAGTTCAAATCTGATTTTGTGCATATCCGATTGAAATCCAATCAGATGCAGCAAGTGTGAATGGCAAAAAAAAAAAAAAAATCGCATGAAATGCAACTTTTTACAAATCAGTTTTGAGCTACTTTCAAATGTGGTTTGAAATCCTATTCCAATCACTGTTCTGTAAATCCATTTCAGTCTTAAACTCACAGTTTTGATGCTCAAACACACAGTAATCCCACAAGCTTGCTTCCTCCTGCACATGTCCTGACACGTCAAAAAATGTTGTGCTTCCCTCCATTACATACTTGACTTAACTTCTTCTTC

Function

NR:

description
Zgc:113298

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09321409_09339033.mRNA False 1468 mRNA 0.35 4 9321340 9339964
TU184403 True 518 lncRNA 0.36 1 9325476 9325993

Neighbor

gene id symbol gene type direction distance location
CI01000030_09308467_09315467 NA coding upstream 5280 9307812 ~ 9316060 (+)
CI01000030_09300172_09306760 NA coding upstream 13966 9299805 ~ 9307374 (+)
CI01000030_09259092_09261043 NA coding upstream 60297 9258216 ~ 9261043 (+)
CI01000030_09241979_09249271 NA coding upstream 72055 9241637 ~ 9249285 (+)
CI01000030_09214411_09224921 NA coding upstream 96399 9214280 ~ 9224941 (+)
CI01000030_09361364_09379014 NA coding downstream 21071 9361035 ~ 9379721 (+)
CI01000030_09509234_09514703 NA coding downstream 168625 9508589 ~ 9516002 (+)
CI01000030_09526436_09552770 NA coding downstream 186291 9526255 ~ 9554552 (+)
CI01000030_09598376_09634083 NA coding downstream 258190 9598154 ~ 9634480 (+)
CI01000030_09691687_09697272 NA coding downstream 350832 9690796 ~ 9697492 (+)
G162441 NA non-coding upstream 36729 9284384 ~ 9284611 (+)
G162439 NA non-coding upstream 38251 9282858 ~ 9283089 (+)
G162438 NA non-coding upstream 39505 9281528 ~ 9281835 (+)
G162389 NA non-coding upstream 78601 9200234 ~ 9242739 (+)
G162449 NA non-coding downstream 16794 9356403 ~ 9357014 (+)
G162452 NA non-coding downstream 42314 9382278 ~ 9382506 (+)
G162454 NA non-coding downstream 49176 9389140 ~ 9389367 (+)
G162459 NA non-coding downstream 61886 9401850 ~ 9402063 (+)
G162460 NA non-coding downstream 65441 9405405 ~ 9405644 (+)
G162137 NA other upstream 749614 8568010 ~ 8571726 (+)
G161986 NA other upstream 773015 8544582 ~ 8548325 (+)
G162088 NA other upstream 1081736 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1448568 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 2118855 7200104 ~ 7202485 (+)
CI01000030_10039688_10047019 NA other downstream 702829 10039358 ~ 10047210 (+)
G162297 NA other downstream 793335 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1151482 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1398617 10738087 ~ 10751548 (+)
G162432 NA non-coding upstream 88913 9235564 ~ 9236563 (+)
G162318 NA non-coding downstream 5453 9331446 ~ 9333904 (+)

Expression


Co-expression Network