CI01000030_09361364_09379014


Basic Information

Item Value
gene id CI01000030_09361364_09379014
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9361035 ~ 9379721 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09361364_09379014.mRNA
ATATAAAAATAAAAGACAAGAGTTAAAGGATAAGATGAAGGAAATGGAGCATAATACAATATCATTAGAAAATACTATTATCTTTTGTTTGTTTGTTTGCTTTTTTCATTTCCCATCGATGCTCCACACTCCAGTTCAGTTGGTGGCGGTAATGCACCGAAAGCTGGTCTGTCAACCGCCAATAAATTAAGAAGAAGAAGATGAAGAAGAAGTGAAAACGAAACTTTTGGTGTAATGCAGATTAAGTTACCTTTTTTATGTACCTGCATCATAGAGTGTAAAAAAAGGATCTGCATTTTTTTTTTTTTTTAATTTGTGTGTATGTGAAAATGAAGTTTCGATTAATTTTGTTCTTGCTGTTATTGTTTGTATTTAACCCTGGTATTTTTGATGATGATATTGTCAGTGTGTCAGTGATGGAGGGAGATCCAGTCACACTACACACTGGTGTTCACACACACGAACAAGAAGAGATTAAATGGTATTTTAATGAAATTCGAATAGCTGAAATCAGTGGAGATCTCAGTGACATCTGTACAGATGTTCAGTGTAATGAAGGTACTGAGAGATTCAGAGACAGACTGAAGCTGGATCATCAGACTGGATCTCTGACCATCACAGACACCAGAACCACAGATTCTGGACTCTATGAGCTAAAACTCATCAGCAGCAGCATCAGCGAAAAGATCTTCAATGTTACTGTTCATGGTTTTCCTGCTACAGAACCAGATAAAAAGTCAGTGCAGAAGGGAAAATCTCTCACTTTAGATCCTGATGAAATAAGAAACCCAAATGATGTGATGACGTGGTATTTTAATGATATTCCCATCGCTGAAATCACTGGATATCAGAGTAAGGTCTGTGAAGATGATCGGTGTAAAGAGAGATTCAGAGACAGACTGGAGGTGAATTATGAGACTGGATCTCTGACCATCGCAAACACCAGAAACACAGATGCTGGAGTTTATCAAGTAAAGATCAACAGCATCAGTCTTCGTCGCATCAACAGTGGCGTCGTTTTGAAGCGCTTCGGCGTTACTGTTAAAACCCCTCTAGAGGAACTCAAAGTAGAGGGCCACACTGGCCAGAATATTACATTAGACAGGCTGAGAACAGTTAAAATTGAACTTTACACTTTATTTATCACACAAAGTAGAATTCTGAGAGCTGGATATAACTACAGAAGCAACTACAGGATCACAGTTTACAATACAAAAGGGGAAAATCACATTATACAAGAAAATAGCATACCTGATACAAAACACAAACAAGCAGTCTCTTTGAGTGAATTGCACTTAATAAACATGATGTACACGATGAAGAAGATCCCGACTGCAGCAACAATCAACAGAGATCCAGCGGCAGCAACAGAGATCAGCGCTATCTGAGAGTCTGAGACTGGATGAAGTGAAGGACAGTGTGTTGTGATGATAAAGAGAGACAGTCAGTGAATAAGTGCATAAACACTAATATCAGCGCTGTCGTACCTGCGCATGTGTGACAGAGTTGAGTGATGTCCAGATGTTGAGTCTGGTTGCTGATGGGATTGTTCAGCACACAGCTGTAGGTGTTTTTATCCTGATATTCCACCACTAACTTACGTGTGCCTGTTCAACTTCCTACTGATTTTCCTTTAGCAAATGTGAAATGTTAGTGATAAGTCATTGATTTAATGAGCCAAAACATTATGACCACCTGCCTAATATGCTGTTGGTCCTCCGTGGAACTGATTGTTTGCTTACTATCTTCCCAGACCTTAATACGTGGCCTTGTTAGGAGATGATCAACGATATTTGCTTCACCTGTGATTTGTCAATATGTTTTAGCTCATCAGGGTACAGCGTTTATTATTGGCTCTACTGTGAGATTTATTTATAATGTTCCCTATGGTTCAAAGGTAGAGCTATTAAACATTGTACGCCCAATTGCTTATAAAAGTCACAGCACACCTCTCCTTAACAAGCCACACATCTGAACACCTCATTCATGGGTCTACAACAAATGGCGCGGGATGAGTTACATGCCAAAGTATGTATGGACAAAGAAGTATTCGAGATGATAATAATGGTGATGCTTTGCTTCACAAGCACAACCA

Function

NR:

description
hypothetical protein cypCar_00048661, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09361364_09379014.mRNA True 2095 mRNA 0.39 7 9361035 9379721

Neighbor

gene id symbol gene type direction distance location
CI01000030_09321409_09339033 NA coding upstream 21071 9321340 ~ 9339964 (+)
CI01000030_09308467_09315467 NA coding upstream 44975 9307812 ~ 9316060 (+)
CI01000030_09300172_09306760 NA coding upstream 53661 9299805 ~ 9307374 (+)
CI01000030_09259092_09261043 NA coding upstream 99992 9258216 ~ 9261043 (+)
CI01000030_09241979_09249271 NA coding upstream 111750 9241637 ~ 9249285 (+)
CI01000030_09509234_09514703 NA coding downstream 128868 9508589 ~ 9516002 (+)
CI01000030_09526436_09552770 NA coding downstream 146534 9526255 ~ 9554552 (+)
CI01000030_09598376_09634083 NA coding downstream 218433 9598154 ~ 9634480 (+)
CI01000030_09691687_09697272 NA coding downstream 311075 9690796 ~ 9697492 (+)
CI01000030_09724422_09740444 NA coding downstream 344634 9724355 ~ 9740578 (+)
G162449 NA non-coding upstream 4021 9356403 ~ 9357014 (+)
G162318 NA non-coding upstream 27131 9331446 ~ 9333904 (+)
G162441 NA non-coding upstream 76424 9284384 ~ 9284611 (+)
G162439 NA non-coding upstream 77946 9282858 ~ 9283089 (+)
G162452 NA non-coding downstream 2557 9382278 ~ 9382506 (+)
G162454 NA non-coding downstream 9419 9389140 ~ 9389367 (+)
G162459 NA non-coding downstream 22129 9401850 ~ 9402063 (+)
G162460 NA non-coding downstream 25684 9405405 ~ 9405644 (+)
G162463 NA non-coding downstream 37811 9417532 ~ 9417856 (+)
G162137 NA other upstream 789309 8568010 ~ 8571726 (+)
G161986 NA other upstream 812710 8544582 ~ 8548325 (+)
G162088 NA other upstream 1121431 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1488263 7868292 ~ 7886228 (+)
CI01000030_10039688_10047019 NA other downstream 663072 10039358 ~ 10047210 (+)
G162297 NA other downstream 753578 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1111725 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1358860 10738087 ~ 10751548 (+)
G162821 NA other downstream 1486291 10866012 ~ 10868440 (+)

Expression


Co-expression Network