CI01000030_09509234_09514703


Basic Information

Item Value
gene id CI01000030_09509234_09514703
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9508589 ~ 9516002 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09509234_09514703.mRNA
TCATAAAAGCAGAACAGGAAGAAGCCCTTCTTCACCCACAAACTGAACACACATACACCTAAGACTGCCTCCCACGCAAATGCTGTTTGTCCATTCAACAGGTCAAACCACACTTCTGGAGAAAATACAGACCACAGTTTCAGTTTGACTCAGAAGATAAACTGCTAGTATAACAGTATCACTTCAGTAAAAAAATGGTAATGTGCGATTGTGGACTGTTTTAACTTTTCTTTGGTTTATTTGTTTGTTTGTTTGTTTGTTTTGTCATACCCAACAATCGAATGAATATACAATTTTGTTAAAACTAATAAGCTTTATTTTACCATGACATTTTGGAAGATTTACACAATATGCAACTCCCCCCTACTACTTAACATAGTCAGACAACAAACCTTTTTAAAACTATCAATGTTAAATGATAAAAATGAATGTATTTGATATTAAGACATTTTAAAGTCTTAATAAGAGCCAGAAGAACATTATATATATATATATATATATATCTACACAATATGCCATCAGATTGTGTACGTGTGAACTAGGAGGATCGTCAAACTCTGTTGGGGGAGGATTCAGACAGTGTTTGTTTCAAGTTTAAATGATATTTTGGAGAGCATCAGACCTTTCTCTGAGCTATTGAAGAAAATGTTTTACATGCTTGTCTTGTTCTGTTTGTGCGGTGGTGTGTTTGGTGATTCAGTGTCAGTGATGGAGGGAGGTTCTGTCACTTTATACACTGATGTTACTGAAATACACAAAAATGAAGACATTCTGTGGAGATTTGGGGCTGAAAACACTCTAATAGCTCAAATTGAGGGGCAAATCTTCTCCACATGTGATGACATTCCTGATGGAAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACATCACAACTGAACATGCTGGAGTTTATAAACTAGAGATAAGTGGAGTGAAACTGTCATCTAAAACATTCAGTGTTTCTGTCTATGGAAACAGTTTAATGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGACATCACTCAACTCTGTCACACATGTGCAGTCTCTCTGATAGTGCTGATCTCTGCTTCTGCTGCTGTAGGATTTCTGTTGATTGTAGTTGGATTTGGGATTTTCTGCGTGTGCAGGAAACTCAGAAAAACTGACCCAAAAGGCAAGTGTTACCTACTGTTCTTAAACAAGTATTAAATATACACTAAGCCTGGTTTCTTAGATTTAGCGAGGGTTAGGCCTTAGTTCAATTAGGACATTTAAGTAGCTTTGATAAACATACCTTAGAAAAAAAAAAAAAAAAAAAAAAAAACATTAGTGGTCTGCATCTTGAGACAAAACAATGACACTCACTGATATTTTAAGATATGCCAATGCAAGTTTCTTTCAGTTTACACATCCATAGCCCTGATGATAGCCCTAATTATCATAAGGTGAACACCCTCATTTTCATTGAAAGAAAGAAGAAATAATGTGTAGTTATTGAGTTATCTATATAATGACACTGAACAGCATTCTTTACTCTTCACTCGGACAAACAGTGCATCACTGTAAGTACAAACATAGAAATGCCATCTCAATTAGAAGATCAAGGTAAATTGCATTTAATTTGTCTTCTGGGAAACATGCAAGTATCTTCTGTTGCTTCCAAAGGGCAGTACTAAATGAAAAAAAAAAAAAAAATGATATTCAAGCGAAATAAGAAAAATTTGGACCTCTTCATCGTGTTCAAAAGTTTTCACCCCGACTCTTAATGCATTGTGTTTCCTTCTGAAGCATCAGTGAATGTTTGAACCTTTTTTAATAGTTGTGTTTGAGTCTCTCAGTTGTCCTCCATGTGAAAAGATGGATCTCAAAATCATTCAGTCACTATTGTAAAGGGTTCAAATATGCAAAAGATGGTGGAAAACTGGAGAATTTTTGCCACCTGGAGATTTTTTCTGAAGAACAGAGCTCAGTTTAACTGCTCAGAATAAACAAGGGACTCATGAACAACCATCACACAACAAAAAACAGTCGTAGATCATCCAGATAACCACACACTGTATTAAGAATCAATGGTTCACAAACTTTTGAACTGGGTCATTTTAATAAATTCAGCTATTTTTTTTGTCTTATGGATTATATGTAAACATCATTTATGTAAAATATCTTACTCAGGACAGTACTAAATAAAAAATAACATGCATTTTGTATAATCTCTCTTTTTTTGTTAAAATTTTGATTCTGAGAGTGGTTCACATACTTTTTCTTGCAACTGTATTTATAAATTGTGTAAAGAATGTATTTCTAAATGTAATGATATTGTTATTGTCCAAACAGTTCAGAATTGTGAAGATGAGATCATTTACACAGAGCCAACGTACTACAAACGAAAAGCACAGAAATCGGTAAAATCATTTATTACTAATTTGTGTTCTGTGTCTCTGTCATTTTAGCAGTGTGAAACGCTGACTCACATCACATAATACTCAATACACTGCAGTCAGGATATTA

Function

NR:

description
hypothetical protein cypCar_00041707

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09509234_09514703.mRNA True 2610 mRNA 0.35 4 9508589 9516002

Neighbor

gene id symbol gene type direction distance location
CI01000030_09361364_09379014 NA coding upstream 128868 9361035 ~ 9379721 (+)
CI01000030_09321409_09339033 NA coding upstream 168625 9321340 ~ 9339964 (+)
CI01000030_09308467_09315467 NA coding upstream 192529 9307812 ~ 9316060 (+)
CI01000030_09300172_09306760 NA coding upstream 201215 9299805 ~ 9307374 (+)
CI01000030_09259092_09261043 NA coding upstream 247546 9258216 ~ 9261043 (+)
CI01000030_09526436_09552770 NA coding downstream 10253 9526255 ~ 9554552 (+)
CI01000030_09598376_09634083 NA coding downstream 82152 9598154 ~ 9634480 (+)
CI01000030_09691687_09697272 NA coding downstream 174794 9690796 ~ 9697492 (+)
CI01000030_09724422_09740444 NA coding downstream 208353 9724355 ~ 9740578 (+)
CI01000030_09754796_09761721 NA coding downstream 238571 9754573 ~ 9763742 (+)
G162488 NA non-coding upstream 2377 9504774 ~ 9506212 (+)
G162487 NA non-coding upstream 8698 9499416 ~ 9499891 (+)
G162486 NA non-coding upstream 10386 9497986 ~ 9498203 (+)
G162485 NA non-coding upstream 15033 9493314 ~ 9493556 (+)
G162484 NA non-coding upstream 20546 9487547 ~ 9488043 (+)
G162500 NA non-coding downstream 23781 9539783 ~ 9540016 (+)
G162501 NA non-coding downstream 24766 9540768 ~ 9541065 (+)
G162503 NA non-coding downstream 28722 9544724 ~ 9544938 (+)
G162398 NA non-coding downstream 56426 9572428 ~ 9963252 (+)
G162449 NA other upstream 151575 9356403 ~ 9357014 (+)
G162137 NA other upstream 936863 8568010 ~ 8571726 (+)
G161986 NA other upstream 960264 8544582 ~ 8548325 (+)
G162088 NA other upstream 1268985 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1635817 7868292 ~ 7886228 (+)
CI01000030_10039688_10047019 NA other downstream 526791 10039358 ~ 10047210 (+)
G162297 NA other downstream 617297 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 975444 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1222579 10738087 ~ 10751548 (+)
G162821 NA other downstream 1350010 10866012 ~ 10868440 (+)

Expression


Co-expression Network