CI01000030_09526436_09552770



Basic Information


Item Value
gene id CI01000030_09526436_09552770
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9526255 ~ 9554552 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000030_09526436_09552770.mRNA
ATATAAAAACTGTGGCTAAAAGCAGCATGCATAAAAATTTAAATGTAAACATGTTATTTACATGGGATATTTAAACTATAAACTGAAAATAATTTATAGTATGCAAACAGGTTTATAAAAATATGCTATGATCACTACTTGGTTATATGAATACTGAGTTGTATATGTGTGAGGATGGAATATGACTAAGGATGTGGGTTATATGTTCAAGTTCCCATTCAGCCCCATCAGCTGCCGCGATCCAATCCTCCTCAGAGGGTTGCTTCGGGTGGTGGTCCATCAGGCCAAGGCACTGAAGGACCTACACGAGGGTGGTCACGATCCGCAAGTTCTCCAAGAACTTTGTACCGTGACGGACCTCACGCTTTACGGAGTGTCAGTGTCTGTGATGGAAGGAGATTCAGTCACTCTACACACTGGTGTTGAAACAAACCAACAAGACAAGATTAAATGGTATTTTAATGACACTCGGATCGCTCAAATCAATGGCGATCTCAGTTGTATCTGTACAGATGTTCAGTGTAATGAAGGTACTGAGAGATTCAGAGACAGACTGAAGCTGGATCATCAGACTGGATGTCTGACCATCATGAACACCAGAACAACAGACTCTGGAGTTTATCAACTAAAGTTCATCAGCAGCAATAACAATGATAGGACCTTCAATGTTTCTGTCTGCGGTGTTCCTGATGCAAAGATGGATAAAATGAGGACAAAGTCAGTAAAGGAGGGAGAATCTGTCACTTTTGATCCTGGTGAAATAAGAAAAATAAATGATTTGATGATGTGGTATTTTAATGACACTCTCATTGCTGAAATCACTGGAGATCAGAGTAAGATCTGTACAGATGATCAGTGTGGTGAGAGATTCAGAGACAGACTGAAGCTGGATCATCAGAATGGATCTCTGAACATCACAAACATCACAAACACAGACTCTGGAGAATATAAACTACTGATAATCAGCAAGAGGTGCAGCATCATAAAGAGCTTTGATGTTGCTATTAATGATGTTCAGTGTAATGAAGGTACTGAGAGATTCAGAGACAGACTGAAGCTGGATCATCAGACTGGATCTCTGACCATCATAAACACTAGAAACACAGACTCTGGAGAATATACACTACCGATCAGCAGGAGCAGCTTCAACATAAAAAGGGGCTTCAGTGTTTCTGTCACTGATTCAGGTCTGTCTTCAGCTGCTGCAGCAGGAATAATTGTTGGTGTCTTGCTGCCTGTGGCGGCTGTTGTGATTTTTTTTGCTGCACGTGTCAATAACCAGAACCTCAGTACTAGGGATGTACTGATCAAGTTTTTTGTGCCCCTGATCCAACATGGGTCAATTTATCCAATCTGTCCTGATTTGAAACTTGTCAGCACTTGTCCAAGTGCTTGGTACACACATCAATCCAGTATATACAGGGATGTTCAGAGAGGGGGCAGGGGCTCAAATGCAAATGGTGTTAAAGAATTGTCCCCTAATCAGAATGAGATTCCACTGGTGGATGATGCCAACGAGACGTCCTCTAATCAGACTGATGCTCTACAGACGAACACTACGAATGGATTGTCCCCTAATCATACTGAGATTGTGCCTGAAGCTGCCAGTGAGACCTCAACGTAACTTTTTTTTTTTTTTTAAGATTTATTTTTTGTGTTTTTTGCCTTTATTATGAGAGGACAGTGAGTAGACAGGAAGCAAAGTGGGAGAGAGGAGGAGGACAGGGTCAGGAAAGGTCTGCTAGCTGGGACTCAAACTTGGGTCACCTGAAGTTCAGTGGTTATATATTTCAACACACTACCCATGATCCTGTTGGTGCAGAATTAATGTAGAGGTCTGCGCGGGACTGTTTTTTTCGTCCCGCTCCCGCAAGGTTCTATTCCGCACGCACCCGCTCCCACCTAAAATTCACTCTGTGTTCACCCGCTATCTCGCAATAAAACTTCCCCTAAAGAGAGTGATTGGGGATAACAAATATAAAATGTTGCATAGCATATACAAGATTTTTATTTGTCTGATGATGCTGTCAACACCCTAAAAAATGTCAGAGAAAAAATGCCACAAAGAATAATAGACTAAATATCACAGAGAAAATTAGGCTACATTAAATAGCCTACAACATATCCCTCAAAACTATAGGCTAAGCCACAGATACATATAAACGAGAACTGTTGGCTTACTAGCTATACTGCAAAATGAAATCTTTTTTAACATCCACGCAAGAAAAGAATGATGCTGACTGACGACCATTTCAGAACGTCTCTCCTCCAAAATCCGATCACAAAGGTTGAATGTTCTTTGAAGGTGCACTCGCGCAGACCTCTAATGCAAAGAACATACCTTGCCAGGTTTCTCAGGACAGGGAACTGGGGACTGTGGGAACGCCACCACTGCAGGAAGTTTGTTCACTTCAAGTTAAAGCACAGATGCGCTGATGTCAGAGCATCTCGGGAGCAACCGGGTTATTGTGAGACCGCCCGCTCCCGCCTAAAGTACACTATAGTTACCAACCGCAATCCGCCTTTCATTCAAAATTTAATCCTGTGCAGCAAGAAATCTTATCGGGTCCCGCGGTTCCCACGGGGCAGCCGTGGAAATGCAGACCTCTACTCAATGCAACATCACTAATTACTTTGATATGTTAGTTGAAATGGAAATACGAGAATATGGAAAATAAGAGATTTTCTCATTTTCCATCCTCTCTTTGTCAGCCCTAACCAATACCAAAAACAAAAATTATTTTATGAATTACTTACCCTCATGTCATTCCACACCCGTAAGACCCTTGTTCAGTTTCAGAACACAAATGCAGATATTTTTGATGAGATCTGAGCGATTTCTATTACTTCATTGCTAAAGTAAGGACATATTAAAGTAATCCATATGATCTAGTGGTTTAACCTCAATTTTATGAAGTGACACCAGCGCTGCTTTGCACAAAGACATGATTTACTATGTTAAGAAAATATTGACCTCCAATCCAGTAGGGGGAGCACCACGATGCATATGTGTTGTTGACTTAAGAGCAGACAATGTTCTTTGAATTCACTTTATATAGTGTTATTTTGTAAATAAAAGGGTTAATTTTTTTTTTTTTTTTTTTTTTGTGCAAACAAAGCACTCATGTTGCTTCATAAAATTGAGGTTAAACCACTGGGATCACATGGATTACTTCAACAATGTCTTTCCTATTGTTCTGGGCCTTGAATGTGCGAGTTGCGTTGCTGTCAATGAAGGGACAGAAAGCTCTGAGATTTCATCAAAAATATCTTAATTTGTATTCTGAAGATGAACGAAGATCTTACGAGTGTGTAACGACACGCGGGTGAGTAATTAATGGCAGAATTTTCATTCTTGGATGAGCTAACCTTTTAAGTTATATAGACATTTCTTCAAAAAATACAA

Function


NR:

description
hypothetical protein cypCar_00045274

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000030_09526436_09552770.mRNA False 3406 mRNA 0.40 8 9526255 9554552

Neighbor


gene id symbol gene type direction distance location
CI01000030_09509234_09514703 NA coding upstream 10253 9508589 ~ 9516002 (+)
CI01000030_09361364_09379014 NA coding upstream 146534 9361035 ~ 9379721 (+)
CI01000030_09321409_09339033 NA coding upstream 186291 9321340 ~ 9339964 (+)
CI01000030_09308467_09315467 NA coding upstream 210195 9307812 ~ 9316060 (+)
CI01000030_09300172_09306760 NA coding upstream 218881 9299805 ~ 9307374 (+)
CI01000030_09598376_09634083 NA coding downstream 43602 9598154 ~ 9634480 (+)
CI01000030_09691687_09697272 NA coding downstream 136244 9690796 ~ 9697492 (+)
CI01000030_09724422_09740444 NA coding downstream 169803 9724355 ~ 9740578 (+)
CI01000030_09754796_09761721 NA coding downstream 200021 9754573 ~ 9763742 (+)
CI01000030_09799840_09805801 NA coding downstream 243451 9798003 ~ 9805819 (+)
G162488 NA non-coding upstream 20043 9504774 ~ 9506212 (+)
G162487 NA non-coding upstream 26364 9499416 ~ 9499891 (+)
G162486 NA non-coding upstream 28052 9497986 ~ 9498203 (+)
G162485 NA non-coding upstream 32699 9493314 ~ 9493556 (+)
G162484 NA non-coding upstream 38212 9487547 ~ 9488043 (+)
G162398 NA non-coding downstream 17876 9572428 ~ 9963252 (+)
G162413 NA non-coding downstream 34376 9588928 ~ 9592699 (+)
G162335 NA non-coding downstream 83986 9638538 ~ 9648574 (+)
G162530 NA non-coding downstream 127816 9682368 ~ 9683664 (+)
G162359 NA non-coding downstream 156466 9711018 ~ 9716656 (+)
G162449 NA other upstream 169241 9356403 ~ 9357014 (+)
G162137 NA other upstream 954529 8568010 ~ 8571726 (+)
G161986 NA other upstream 977930 8544582 ~ 8548325 (+)
G162088 NA other upstream 1286651 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 1653483 7868292 ~ 7886228 (+)
CI01000030_10039688_10047019 NA other downstream 488241 10039358 ~ 10047210 (+)
G162297 NA other downstream 578747 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 936894 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1184029 10738087 ~ 10751548 (+)
G162821 NA other downstream 1311460 10866012 ~ 10868440 (+)
G162503 NA non-coding upstream 2356 9544724 ~ 9544938 (+)
G162501 NA non-coding upstream 6229 9540768 ~ 9541065 (+)
G162500 NA non-coding upstream 7278 9539783 ~ 9540016 (+)

Expression



Co-expression Network