XLOC_008853



Basic Information


Item Value
gene id XLOC_008853
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 47850879 ~ 47852351 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00019088
GTGACATCCATTTATTACGCAATTAAGAGAAATTTCAAATTACAAAGATCAGTTTATTGAAACACCTGAATGTTCTGTAGTCAAACTCTGAAATCCGGAACAACACAAGCAAACGGAGCAGGATTAAAGAAGAACGTTTCCAATGAGTGCCTGAGGAATCATGAGGGGACCAAACTTCTGCTCCGAGAGACAATTAATCACGTGGCAAAACCCAAAAACAGCATCGAGCCCAATTTACAGATTCCCATCAAATCAGGAAATAAACAGGATCCGTGGTGTAGAAATGTCTCCGCCTCTTCAAAAATATGCTCTAGATCTATGAAACCTGCTTAATATGAATGATTAAGAACACAAACAGACCTCACTAGTTATTCTGGATATTGCAATAACAAACAGGAAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00019088 True 400 lncRNA 0.39 2 47850879 47852351

Neighbor


gene id symbol gene type direction distance location
XLOC_008851 CU633855.1 coding upstream 19463 47828719 ~ 47831416 (+)
XLOC_008849 stard10 coding upstream 76168 47746176 ~ 47774711 (+)
XLOC_008850 NA coding upstream 102984 47746901 ~ 47747895 (+)
XLOC_008848 CU655829.1 coding upstream 125544 47721873 ~ 47725335 (+)
XLOC_008847 paf1 coding upstream 227427 47618221 ~ 47623452 (+)
XLOC_008854 NA coding downstream 5263 47857614 ~ 47858171 (+)
XLOC_008855 NA coding downstream 29619 47881970 ~ 47883643 (+)
XLOC_008856 NA coding downstream 44901 47897252 ~ 47900007 (+)
XLOC_008857 otx5 coding downstream 51513 47903864 ~ 47909281 (+)
XLOC_008858 NA coding downstream 112930 47965281 ~ 47968121 (+)
XLOC_008463 BX663520.1 misc upstream 26598597 21252191 ~ 21252282 (+)
XLOC_008846 CABZ01087560.1 non-coding upstream 236149 47609322 ~ 47614730 (+)
XLOC_008837 CABZ01088337.1 non-coding upstream 527903 47322860 ~ 47322976 (+)
XLOC_008859 NA non-coding downstream 140544 47992895 ~ 47993604 (+)

Expression



Co-expression Network