CI01000030_10039688_10047019


Basic Information

Item Value
gene id CI01000030_10039688_10047019
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10039358 ~ 10047210 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10039688_10047019.mRNA
ATATAAATGAAAGAGACAATGTCGGTCAGTTGGCTCTCTGTTGTGTTTTAATAAAACAATGCATTCAAATCCATTAAGACATTTTAGGCCTGTGATGTTGGGACAAGGATATGTGTCTGTCGTGCTGTTTTTTTTTTGTTTGTTTTTTTGCAGCAGTTCAGCCAGTTCAACATGTCGAATCAGTGTCTGAGCATGAGTAAGAAAGAGAATGCTGATTGGCTGTTCTGTTGATTAAACAAGTCAGCGCACAAGAAAAGTGAAAGTAATGAAAGTGACCGAATAAGTCAAGACAGAAGGCTGTTCTAATTTTACGTCATCTTACCTTGGCTTATGATAGCAAGAAGTACAGTTAGCATCTCAGATACTGGTGATTCAACAGGTGCATCTGGTGTGGATACAGACAGAGTGTCGGTGAAGGAGGGAGATTCAGTCACTTTTCACACTGGTGTTCAAACAAACCAACAAGAAGTTATTAAATGGTATTTTAATGACATTCGCATAGCTGAAATCACTGGAGATCTCAGTTATGGTTGTACAGATGTTCGGTGTAATGAAGGTACTGAGAGATTCAGAGACAGACTGAAGCTGGATCATCAGACTGGATCTCTGACCATCACAAACACCAGAAACACAGACTCTGGAGTTTATGAACTGAGGAGCATCAGCAGCAGTGACAGCACTGACAAGACCTTCAATGTTACTGTCACTGGTGTTTCTGCTGCTGAACGGGATGAAATGAAATCCATATCAGTGAAGGAGGGAGAATCTGTCACTTTGGATCCTGATGATGCAAAAACAACAAGCGATGTGATTTCATGGTTTTTTTTAGCTAAAATCACAGAAGATCCAAATAAAATCTGTTCAGATGTTCAGTGTAATCAAACTGTTCCAGATTCAGATCTGTCTCCAGATGGTGTAGCAGTAATAAGTGCTGCTGTTATTTCTGTTCTGCTGGTTGTAGCTGTAACTGTTACTGTGGTTTACTGTCGCCGCAGGATCCATACACCAGTACCACAGACTGAGAAAAAAGATAACTCGCTTGATCTGAAAGACATTCCTTTGAAAGAAGAGGACATATCCTTGAATCAGACTCAGGCCAACAAAACAATATAACATTTTGATAACATAACTGAAAGGGAAACTGAAGAGTATTAGGAAATGGTGGAGAGAAGAGGATCAGCTGAAAGTCTCTTCAGAGAAATTGTCACAATTCCAAGATTTCAGTGATCAGCACCAATACCAATCAAATTACACCTATTACAAACCAATTTACATATGAAATCAGAAACTGATTCAAATGATAA

Function

NR:

description
hypothetical protein cypCar_00049082, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10039688_10047019.mRNA False 1304 mRNA 0.39 6 10039358 10047210

Neighbor

gene id symbol gene type direction distance location
CI01000030_09989586_10008913 NA coding upstream 30203 9989367 ~ 10009155 (+)
CI01000030_09922237_09930221 NA coding upstream 108990 9922049 ~ 9930368 (+)
CI01000030_09876738_09883981 NA coding upstream 155353 9875285 ~ 9884005 (+)
CI01000030_09847512_09854804 NA coding upstream 183682 9847422 ~ 9855676 (+)
CI01000030_09799840_09805801 NA coding upstream 233539 9798003 ~ 9805819 (+)
CI01000030_10099125_10101681 NA coding downstream 51748 10098958 ~ 10102160 (+)
CI01000030_10134835_10135293 NA coding downstream 87625 10134835 ~ 10136130 (+)
CI01000030_10140982_10145096 NA coding downstream 92673 10139883 ~ 10145189 (+)
CI01000030_10148536_10153337 NA coding downstream 100007 10147217 ~ 10153439 (+)
CI01000030_10164557_10167430 NA coding downstream 117154 10164364 ~ 10169382 (+)
G162572 NA non-coding upstream 1065 9975317 ~ 10038293 (+)
G162574 NA non-coding upstream 20235 9982711 ~ 10019123 (+)
G162563 NA non-coding upstream 73858 9941888 ~ 9965500 (+)
G162550 NA non-coding upstream 175394 9859491 ~ 9863964 (+)
G162350 NA non-coding downstream 40706 10087916 ~ 10095595 (+)
G162605 NA non-coding downstream 59518 10106728 ~ 10404016 (+)
G162334 NA non-coding downstream 68480 10115690 ~ 10131571 (+)
G162634 NA non-coding downstream 146887 10194097 ~ 10195201 (+)
G162633 NA non-coding downstream 181434 10228644 ~ 10238283 (+)
G162449 NA other upstream 682344 9356403 ~ 9357014 (+)
G162137 NA other upstream 1467632 8568010 ~ 8571726 (+)
G161986 NA other upstream 1491033 8544582 ~ 8548325 (+)
G162088 NA other upstream 1799754 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 2166586 7868292 ~ 7886228 (+)
G162297 NA other downstream 86089 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 444236 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 691371 10738087 ~ 10751548 (+)
G162821 NA other downstream 818802 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 1293545 11362114 ~ 11380772 (+)
G162398 NA non-coding upstream 79541 9572428 ~ 9963252 (+)

Expression


Co-expression Network