CI01000030_10140982_10145096


Basic Information

Item Value
gene id CI01000030_10140982_10145096
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10139883 ~ 10145189 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10140982_10145096.mRNA
GTTTAAAAACAAAAAATTACTGGCAGAAAAAAAAACATAGATAAACTGTAACAATACAGTAATTTCTTATCTTATTAATTACTATTCCTATAAATCTTCTTATAAGCCTATAAAATCTGTTACATTTGGCATACATTAATTGTTAGAAAACAGCCATAAACCTCTAAAACACGCTGTAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAGGCAGGTTGCCAGAAATTTACCGTACAAAATATGGTAACAACATTTTAAGTTTTACAGATCTAACCTAATTTCACTGTAAAAACCATATTTCATTAACTGATGTAATGTCAATTTATCAACCTAATGAAGTACTAACATCTGTTTTGATTTTTAATGTACTGAAAACCACCAACAAACAACAGTGATGAGAAAATCACATGATAAATCAAAGCTCATCACAAGTTTTCCACAAGCTGAGAAGCTGTAAACTACTAGAATGTGCACAGTGTCATTCACACAAACACTAAACACCATCATGGTAACACACATGAAAAATAAACTAGTGTTTATACAGTGTTAAAACTGTCTTATTTCATTTGAGTCCACTGAAAATGATTATTTCTTAACATAAAACTGTAAACACTTCATGTGTAATAGTGAAATAATCAAAACATAACTTTTGTCTATGGGATGACAATAATATTCCAGCTATGAAAGACTTTTAAACTTGTTCACCAAAAAAAAAAAAAAAAACTTTGAATCTCAACAATGCTGACAATCAACAAAATAGATAAACAGATTAGCTCTGAACATCACAAAAAAAGCTACAAAAAGTCATAAAAACGAAAGCAAATAGTAAAAAAAAAAAATGAAGAGAAGATAATAGGACAACACAGCGGTATAATTTATTCCTCTTGAAATGCATGCTAGGAGTCATAAATGAGTCTTGAGCTGTTTCTCAATATACGTTCTTTAGCAATCTTGCATCCTTGTGTTCTCGCTCTACTTCATCATCAAACGTCGGAGTTCAATTCCAATACTCAGGGAGCCATCATCAGGGAGACTGAAACTTGGCTCACCACAGTTGAAAAGTCTGGTCAGGCCAGATTTAAGGTCTGGACATACCAACATGGCTTCTTGTCTTGAGTTCTCTGGCCTCTGCTGGTGTATGAGCTTGAGCAGTGCAGCACTCTATGGAAAGGGAAACATTCTCCAGCTTCTGCTCAGCAGCCTCAATGAGGAGTTCAAGGTCTCTTGCGCCAGAGAGGCACTACTCTGTCGGGAATCTGAGGAATCGAGAGTGGCATCAGCAGGGATCAGGGAGTGGACAGTGTGCATTTGCTTGGACTTTGTGAAGTCTACAGACAAAAGAAGACTGAGCTTGAACAGTGAGGTCATGAAGATCCATCAGTCTACCGTGATTCTGCTGCTGGTTATATGTGCGTCATTGTCCACTTACAGTCAAACTTATGAGGCTTTCAAAAGAAAACATGTTGCTCCAAGAGGCATGCGTGCAAAGTATTGCACTGCTGTGATCGAAAATAGACAAATCAACAGATACAGAGACTGCAAACCAATAAACACCTTCATTAAAGCAACTGAAGCGGAAATTAAAGAAGTTTGTATATCAGGAAAAGGGGATGGAAAGACCTATAAAAGCAATACTTTATTTTATGTGATTGATTGTACTTTTGACAAAAAAGAGTGGAACAGTTGTAAATATAAGGATGATGTTGAAGTACAAAAATCACAAATTACTTTGACATGTGAAGGAGGTGTCCCAGTGCATTATGGTCCTGCAAAGACAGCCGGCTGGATGTAGCATCACATACCTTCAATTTATTTCACTATTGTTTCACTTTGTTTTTGAATATACAAAAACAGACAAGGGAAAAAAGATGAAGACAGAAGAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10140982_10145096.mRNA True 1885 mRNA 0.35 5 10139883 10145189

Neighbor

gene id symbol gene type direction distance location
CI01000030_10134835_10135293 NA coding upstream 3753 10134835 ~ 10136130 (+)
CI01000030_10099125_10101681 NA coding upstream 37723 10098958 ~ 10102160 (+)
CI01000030_10039688_10047019 NA coding upstream 92673 10039358 ~ 10047210 (+)
CI01000030_09989586_10008913 NA coding upstream 130728 9989367 ~ 10009155 (+)
CI01000030_09922237_09930221 NA coding upstream 209515 9922049 ~ 9930368 (+)
CI01000030_10148536_10153337 NA coding downstream 2028 10147217 ~ 10153439 (+)
CI01000030_10164557_10167430 NA coding downstream 19175 10164364 ~ 10169382 (+)
CI01000030_10178017_10185588 NA coding downstream 30287 10175476 ~ 10188119 (+)
CI01000030_10199403_10226165 NA coding downstream 53922 10199111 ~ 10226880 (+)
CI01000030_10246173_10256836 NA coding downstream 99221 10244410 ~ 10256912 (+)
G162334 NA non-coding upstream 8312 10115690 ~ 10131571 (+)
G162350 NA non-coding upstream 44288 10087916 ~ 10095595 (+)
G162583 NA non-coding upstream 58423 10017898 ~ 10081460 (+)
G162574 NA non-coding upstream 120760 9982711 ~ 10019123 (+)
G162634 NA non-coding downstream 48908 10194097 ~ 10195201 (+)
G162633 NA non-coding downstream 83455 10228644 ~ 10238283 (+)
G162632 NA non-coding downstream 91937 10237126 ~ 10237654 (+)
G162650 NA non-coding downstream 139474 10284663 ~ 10299194 (+)
G162355 NA non-coding downstream 152484 10297673 ~ 10490876 (+)
G162449 NA other upstream 782869 9356403 ~ 9357014 (+)
G162137 NA other upstream 1568157 8568010 ~ 8571726 (+)
G161986 NA other upstream 1591558 8544582 ~ 8548325 (+)
G162088 NA other upstream 1900279 8237965 ~ 8239604 (+)
CI01000030_10473378_10509560 NA other downstream 346257 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 593392 10738087 ~ 10751548 (+)
G162821 NA other downstream 720823 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 1195566 11362114 ~ 11380772 (+)
G162951 NA other downstream 1347412 11492601 ~ 11496119 (+)

Expression


Co-expression Network