CI01000030_10148536_10153337


Basic Information

Item Value
gene id CI01000030_10148536_10153337
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10147217 ~ 10153439 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10148536_10153337.mRNA
GTATAAATATGACCCTTCTTCCTTAATAATCTTGAGAATGTTATTGTATTACACTGTCTCTGTGTCTGCTTCATCATTCTCCCGAGATCTCGCGCCGCTGCTGCCACACATTACAGAGGTTGAGACGCCTGTTTCCAACTGACGACTGATATCTTCGAGATCTGCAGATAGTCTACCTGAAAATTAATCTAACACCAAGATTAAGCCTGACTGCATTCACTTGGAATTTGTGAAGTGCATCATAATACATCCCAGACTAGACTGCAACCTGTGAGTTTCAGTTCACACAAGCTCATTTTATAGTTTTGTAACATGTGCTTTGCTGTTCTGTTTAAAGCTGCAGTCCGTAAGTTTTTTGGTTAAAAATGATCCAAAATCAATTTTTGAGCAAGTACATCGCCTTACCTTACCCTGATTCACAACAGTAAGCTTGTAATAATGTTTTGTAATAAGAGCAGAACTGGTAGGTTTCACTGGATATTTAAGCATGACGCCGTTTGTCTTTGAGTCCCAGCTAGTAGGCTATATAGCATGTGATGATCCTGCTGGTAGGCGGATCATTTATAGCAGCTGAAATAGCTAAACTTATCATTTTGATGGTGGATTGTAATCCAGAAAGGTCCAAATGACAATCATCAGTGACAACTGGAGATTCACCCGTAGTCAAAAGCAAAAGACTTCGGACTGAGAAGTGGCTACAGAAATTGAAATCTACAGGTAATGCTAAAACACACTGAATACACATAGTCACGCAATGCTGATGTTGTTAACATTAACAATTTGAGAGCAAAGTATAACAATAATAATAATTTGCATGGTTTGGCATGATCTGAGCTAATCGATCGTTAGATTTAATCACCATTGGTAGAGCGATTTATTGTAATGCTTTTTTTTTTTTTTTCAGTTGGTCAGAACAAAAGTGGTTATACATGTTACTTGTTCAGATGACTTTTTTCCGGTGAAAATTCTTATTTTGGTCATACTTCTAAGACATAGAATCTGTGTTTCTGAAGTACAGTATCCGCACCGATGTGGTGACTGACAGCAAACAAACATTAGATTCATCTGCGCTGAGGAGTCGTGCCGATGCACAACACACATAAAAAGATAATTCTGCAAATAAACTACAATTGCAGGTTTCAAACAGAGATGGCGACAAAAAACTTACAGACTGCAGCTTTGAGTAGAATTTTTATTTTATTTTCCAAAGCATTGTAATAAGTATACAACAGCAACATATTTTGAGATGTTTTCTGGGGTAAATTGATTTTCTGGGGTTTGTGATTTACCTTGCTTTTAAATGTTAAGACATACAAGAAATGGAATTGGTGGAGATTGGTGGAGGTGGAAACAAAGTCATGGAGATTCATCAGTCTGCTGTGATTCTGCTGCTGATCTTGAGTGTGTCATCCTTCACTCATGGTCAACCAGCAGATATAATGCCCCGCTATAAAAAATTCCTCAATCAGCATGTGGATCCATATATGACTGTGAATGATTGTACCAGTAAAATCGAAAACCGAGTCATCACTGGAACTGATAGTGGCTGCAAACCTGTCAACTCCTTCATAGTAGCAAATGCAGATACAATTAAAGCAGTTTGTGGCAAAGGAGGAACTGCAATAGGTGGAAATCTGTTTGAGAGCAACAACCCATTTTTTGTGGTCAAGTGTACAATAAAAAATAATAGTAAGGGAACTCCAAAGTGTGAATATCGTGGGAATGGTTTCACTCGTAAGATTGTGTTGGCCTGTCAAAAAGGCTGGCCTGTACATTATGAAAGATGCTTTCAAATCGCCCCTGAGGGATACGATTATGCTGTTTTTGAAACACCAGATGGCGCCAATTATCAGATATTTTTCATGCAAGTTGTTAGTGCCAATGTTTTGGATGTTAGCTGTAAGCCTGTGCTGAGAATGACTGTCTTTCACACTAAAGCAACAGCAAAGGCACTTGTTGCAGCACGTCTGCAAAGCAACCAACGGCCTTTAAAGCTGCATTTCAGCTCAGATAATCATGAACTGCAGAGACGCTGCAGCTCGAGGACAGAGTTCAGCACAGCTAACATGGGTAACAACTCTGTGGCCTACTTTCTGTCCAGAGAAAATCTAATGGTATAAAAGCTGATTTTGTACGGGTTATTTTATAATAACAAACCATATTACATGTGATTTTAAACAAATCAAAGTTAATTTTGGCCACAGATCACATCACAAACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10148536_10153337.mRNA False 2222 mRNA 0.38 5 10147217 10153439

Neighbor

gene id symbol gene type direction distance location
CI01000030_10140982_10145096 NA coding upstream 2028 10139883 ~ 10145189 (+)
CI01000030_10134835_10135293 NA coding upstream 11087 10134835 ~ 10136130 (+)
CI01000030_10099125_10101681 NA coding upstream 45057 10098958 ~ 10102160 (+)
CI01000030_10039688_10047019 NA coding upstream 100007 10039358 ~ 10047210 (+)
CI01000030_09989586_10008913 NA coding upstream 138062 9989367 ~ 10009155 (+)
CI01000030_10164557_10167430 NA coding downstream 10925 10164364 ~ 10169382 (+)
CI01000030_10178017_10185588 NA coding downstream 22037 10175476 ~ 10188119 (+)
CI01000030_10199403_10226165 NA coding downstream 45672 10199111 ~ 10226880 (+)
CI01000030_10246173_10256836 NA coding downstream 90971 10244410 ~ 10256912 (+)
CI01000030_10259762_10274068 NA coding downstream 106275 10259714 ~ 10274169 (+)
G162334 NA non-coding upstream 15646 10115690 ~ 10131571 (+)
G162350 NA non-coding upstream 51622 10087916 ~ 10095595 (+)
G162583 NA non-coding upstream 65757 10017898 ~ 10081460 (+)
G162574 NA non-coding upstream 128094 9982711 ~ 10019123 (+)
G162634 NA non-coding downstream 40658 10194097 ~ 10195201 (+)
G162633 NA non-coding downstream 75205 10228644 ~ 10238283 (+)
G162632 NA non-coding downstream 83687 10237126 ~ 10237654 (+)
G162650 NA non-coding downstream 131224 10284663 ~ 10299194 (+)
G162355 NA non-coding downstream 144234 10297673 ~ 10490876 (+)
G162449 NA other upstream 790203 9356403 ~ 9357014 (+)
G162137 NA other upstream 1575491 8568010 ~ 8571726 (+)
G161986 NA other upstream 1598892 8544582 ~ 8548325 (+)
G162088 NA other upstream 1907613 8237965 ~ 8239604 (+)
CI01000030_10473378_10509560 NA other downstream 338007 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 585142 10738087 ~ 10751548 (+)
G162821 NA other downstream 712573 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 1187316 11362114 ~ 11380772 (+)
G162951 NA other downstream 1339162 11492601 ~ 11496119 (+)

Expression


Co-expression Network