CI01000030_10537146_10539791


Basic Information

Item Value
gene id CI01000030_10537146_10539791
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10536191 ~ 10540258 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10537146_10539791.mRNA
ACATTAAAACGGCTGTGAGAAAACTCTTCTCCACTGCAACACTTGAAACTTTGCAGAACAAAGATGGAGAAACAGAAAAGTTAGGCTCATAAGATTTATCTCCTTCAAATATATTTAATGTATTATATTTTATTTAATAGGATGTCCCATTTTATCTAACATGTTAAGGTAAATTGGGACAGTAACAAAACTTGATCCTTTTTGAAAATCGAATGAAGCACATCATTGCATTAGACTGAATTATCACATGAACAGATGTAATACAAATTTATATTGTGGATTGAAATAATGTTTATTCTAGAATTTAAAAAGTTAGTTCACCCAAAAATGAAATTTCTGTCAAGTAATCAACCTCAAGTCATTCCACACCCGTAAGACCTTCGTTTATCTTCAGAACACAAAATAAGATATTTTTGACTTTACTGCTTTTCACGACCTTAAATGTTGTTGCTTTACATTGGGAATAAAAAAAACTCAGATTTTATTGGATTTCATCAAAACAATCTTGATTTGTGTTCTGAAGATGAATGAAGGTCTTACAGGTTTGGAACAACATGAAAGTGAATACTTGACAGAAATTTTATTTTTGAGTGAATTAATCCTTTAAAACTTAACAATTTGATTAGACTTAAACTATGTATGTACAGCCACACAACATGTGCAGCCAACTCAGACATTTCAGCACTTTAGTAACCACGTCCATGTGATTTACATTTGATCAAACAGTTTGGAGTTAATCGCAGCTCTGAAGAGAGAACTGTCCATTTTGACTGCACTTTTTTCACTCTCCTCACTGCAACCTCCCACTCACATGTATTTTTAAGGTGGTGGCGTTTGGCATCTCAAAGGATCATGTGGTCTCTGACAAAGACACGCCTCCAGATACTTAAATATCGCTGTAGTCCAGTAATGCTGTTCCATTCATTCAAAGTACCAAAGCACATGTGAGAAGAAAATGGAGACAAAGAAGTTTTTCGTTTATTTGTTGGCAATTTCTCCATTCTTCTTGGAGGGTGTGTTTGGTGTTGATACAGAAGAAGTGTCAGTGATGGAGGGAGATTCAGTCACTATATGCACTCATGTTAATATAAACCAGCAAGAAAAGATTAGATGGTATTTTAATGACGATCTCATCGCTCACATCAATAGAAGTCTCAGTGACATCTGTACAGATGTTCAGTGTAATAATGGCACTGGGAGATTCAGAGACAGACTGAAGCTGGATCATCAGACTGGATCTCTGACCATCACAAACATCATAGACACAGAGACACAGACTCTGGAAATTATACACTAATCATCGTGAAAGGCAGCGACAGTCAAAAGATCTTCAAAGTTTCTGTTCATGGTGAGTCATCATGTTTGAAAGCAGGTTATGTTTAAATCACATCACTGAGTTTATTGTAGCAGCTGTTTTTCTCTTTTTCTGCATCATTGAACATAACAGAAAGAATTCCATTGATGATCCATTAGTTTTTAACAGTTAATTTTGTTCTGATCATACTATTTCTTATCATCTGTTTAAATGCATGTATTACTTCATATTCATTGCTTTTAGTTCACTGGGGATCCAAAGTGCAGAAGATTATGTAAATGTGTAAAGATCTTGTAGTCTGTTTATCTCGTATATTGATCAGAATGGATTGCAAATCATCATAAATATTTTATATTTTGAAATATTACAATGCAAAAATGTAGAAATGTATATTTCAATGCAGTAATGCATTGTACTATACATGTATGTAATACATGTGCAGGTCTGTA

Function

NR:

description
hypothetical protein cypCar_00048661, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10537146_10539791.mRNA False 1764 mRNA 0.34 2 10536191 10540258

Neighbor

gene id symbol gene type direction distance location
CI01000030_10473378_10509560 NA coding upstream 25120 10471835 ~ 10511071 (+)
CI01000030_10422761_10426202 NA coding upstream 109939 10422652 ~ 10426252 (+)
CI01000030_10333687_10335629 NA coding upstream 200399 10333518 ~ 10335792 (+)
CI01000030_10304328_10313568 NA coding upstream 222564 10304328 ~ 10313627 (+)
CI01000030_10259762_10274068 NA coding upstream 262022 10259714 ~ 10274169 (+)
CI01000030_10540503_10543066 NA coding downstream 38 10540296 ~ 10543215 (+)
CI01000030_10567314_10570556 NA coding downstream 24136 10564394 ~ 10570573 (+)
CI01000030_10581114_10588932 NA coding downstream 40355 10580613 ~ 10589621 (+)
CI01000030_10596446_10602032 NA coding downstream 55959 10596217 ~ 10603637 (+)
CI01000030_10605608_10626845 CERS5 coding downstream 63112 10603370 ~ 10627278 (+)
G162366 NA non-coding upstream 20375 10513888 ~ 10515816 (+)
G162355 NA non-coding upstream 45315 10297673 ~ 10490876 (+)
G162679 NA non-coding upstream 85108 10450489 ~ 10451083 (+)
G162401 NA non-coding upstream 106644 10422929 ~ 10429547 (+)
G162722 NA non-coding downstream 101547 10641805 ~ 10642033 (+)
G162365 NA non-coding downstream 110166 10650424 ~ 10650871 (+)
G162379 NA non-coding downstream 128141 10668399 ~ 10668676 (+)
G162356 NA non-coding downstream 128563 10668821 ~ 10669837 (+)
G162306 NA non-coding downstream 164663 10704921 ~ 10712174 (+)
G162297 NA other upstream 314967 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 490308 10039358 ~ 10047210 (+)
G162449 NA other upstream 1179177 9356403 ~ 9357014 (+)
G162137 NA other upstream 1964465 8568010 ~ 8571726 (+)
CI01000030_10738658_10751094 NA other downstream 198323 10738087 ~ 10751548 (+)
G162821 NA other downstream 325754 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 800497 11362114 ~ 11380772 (+)
G162951 NA other downstream 952343 11492601 ~ 11496119 (+)
CI01000030_10628602_10631875 BCDIN3D coding downstream 4794 10628602 ~ 10632112 (+)
CI01000030_10642268_10643835 NA coding downstream 18460 10642268 ~ 10644314 (+)
CI01000030_10646148_10649874 NA coding downstream 22065 10645873 ~ 10649937 (+)
CI01000030_10664189_10683103 MCM2, MCM2.L coding downstream 39576 10663384 ~ 10683381 (+)
CI01000030_10689813_10702377 NA coding downstream 65640 10689448 ~ 10702993 (+)
G162662 NA non-coding upstream 178376 10358042 ~ 10358319 (+)

Expression


Co-expression Network