CI01000030_10540503_10543066


Basic Information

Item Value
gene id CI01000030_10540503_10543066
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10540296 ~ 10543215 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10540503_10543066.mRNA
CTATATAAAGACATCCATAATTAACTTAATATTCAGCAGTTTTACAGTTTATTTTGTATTTATTCCCACTGAATTTCTCAAGATCCAGGAATTTAATATGCACAATTATTTTAAGTTAATACTTGTTGTGGAGTTTTTTTCCCCAAGAAAATCCTCCAGCAGCTGTTGGTTTGTGTTTCAGGTGTTTCTGCTGCTAAACAAGATGAAATGAAAAGAAAGTCAGTGAAGAAGGGAGAATCTGTCACTTTAGATTCTGGTGAAGCAAGGAAATCAAAAAATGTGACTATGTGGTATTTTTATGACACTATCATCGCCAGAGATCAGAGTAAAGATCTTAACGAGAGATTCAGAGACAGACTGAAGCTGGATCATCAGACTGGATCTCTGACCATCATGAACACCAGAAACACAGACTCTGGAGAATATCATCTACAGATCAGCAGCTGCAGATTCAGCATCATTAGGAGCTTCAGTGTTTCTGTCACTGACGGAGGAGGGTCATGAAGATCAAAGAAGATCTTAACAAGATCACTTTGTGTCTGCAACATTATTCCCATTGACATGAATCAGCAAAAACACACTTCAGTAGTTGAGCTGTTGCAGTTTATTAACCTGGAATATATCTACATTTATCATTTAACATGCTAGTTGTA

Function

NR:

description
hypothetical protein cypCar_00048543, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10540503_10543066.mRNA True 653 mRNA 0.36 2 10540296 10543215

Neighbor

gene id symbol gene type direction distance location
CI01000030_10537146_10539791 NA coding upstream 38 10536191 ~ 10540258 (+)
CI01000030_10473378_10509560 NA coding upstream 29225 10471835 ~ 10511071 (+)
CI01000030_10422761_10426202 NA coding upstream 114044 10422652 ~ 10426252 (+)
CI01000030_10333687_10335629 NA coding upstream 204504 10333518 ~ 10335792 (+)
CI01000030_10304328_10313568 NA coding upstream 226669 10304328 ~ 10313627 (+)
CI01000030_10567314_10570556 NA coding downstream 21179 10564394 ~ 10570573 (+)
CI01000030_10581114_10588932 NA coding downstream 37398 10580613 ~ 10589621 (+)
CI01000030_10596446_10602032 NA coding downstream 53002 10596217 ~ 10603637 (+)
CI01000030_10605608_10626845 CERS5 coding downstream 60155 10603370 ~ 10627278 (+)
CI01000030_10628602_10631875 BCDIN3D coding downstream 85387 10628602 ~ 10632112 (+)
G162366 NA non-coding upstream 24480 10513888 ~ 10515816 (+)
G162679 NA non-coding upstream 89213 10450489 ~ 10451083 (+)
G162401 NA non-coding upstream 110749 10422929 ~ 10429547 (+)
G162662 NA non-coding upstream 181977 10358042 ~ 10358319 (+)
G162722 NA non-coding downstream 98590 10641805 ~ 10642033 (+)
G162365 NA non-coding downstream 107209 10650424 ~ 10650871 (+)
G162379 NA non-coding downstream 125184 10668399 ~ 10668676 (+)
G162356 NA non-coding downstream 125606 10668821 ~ 10669837 (+)
G162306 NA non-coding downstream 161706 10704921 ~ 10712174 (+)
G162297 NA other upstream 319072 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 494413 10039358 ~ 10047210 (+)
G162449 NA other upstream 1183282 9356403 ~ 9357014 (+)
G162137 NA other upstream 1968570 8568010 ~ 8571726 (+)
CI01000030_10738658_10751094 NA other downstream 195366 10738087 ~ 10751548 (+)
G162821 NA other downstream 322797 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 797540 11362114 ~ 11380772 (+)
G162951 NA other downstream 949386 11492601 ~ 11496119 (+)

Expression


Co-expression Network