XLOC_008859


Basic Information

Item Value
gene id XLOC_008859
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 47992895 ~ 47993604 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018805
AGACGTGAGCTCAGGCTGACTGAACATGCTTTCAGGACATTTGGGGACGATCTGAAAGGTTGCTGTGGAAACGGTctcagGATGAAGATGATCTATCAGTGCTGGAGGCAGATTAAATCATCTCCATTTATAATAACACATCAGCGGTGTTCAGCGGCATGTGTTTATTAGCTCTGTCGCCTCTTCTGTTTACATTTACACATGCCACAACTGAGCACAGATGGATTATGTACTGTGTGTGTCAGTCAGAaacatctttatttgtttatttatgtttaatttggACCTTTTTTGATGCTTATTATGATGCTTCATCTGGCTTTAAAtaacgtgtgtatgtgtgtgt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018805 True 346 lncRNA 0.40 2 47992895 47993604

Neighbor

gene id symbol gene type direction distance location
XLOC_008858 NA coding upstream 24774 47965281 ~ 47968121 (+)
XLOC_008857 otx5 coding upstream 83614 47903864 ~ 47909281 (+)
XLOC_008856 NA coding upstream 92888 47897252 ~ 47900007 (+)
XLOC_008855 NA coding upstream 109252 47881970 ~ 47883643 (+)
XLOC_008854 NA coding upstream 134724 47857614 ~ 47858171 (+)
XLOC_008463 BX663520.1 misc upstream 26740613 21252191 ~ 21252282 (+)
XLOC_008853 NA non-coding upstream 140544 47850879 ~ 47852351 (+)

Expression


Co-expression Network