CI01000030_10738658_10751094


Basic Information

Item Value
gene id CI01000030_10738658_10751094
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10738087 ~ 10751548 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10738658_10751094.mRNA
GGATAAATGCCAGGTCAGAACTGGTTATCACATTTTTATCAGTGCAAATCGTCACATGAGTTTGAAATGTTGTAATTTTATACAACTAATTAATTATAATTTATATTAACAAAAACATTTATTATGTATATAGCTACAGAAACTGTCTTTCAAAAAACCTATCCTCAGAAATATTCAAAGAGAGTGAAACAGTAAAGAAATTTGACAACTAAACCATAGTAACTCAATGCGTCATAATTCAAAACATTTTCCATTGATAGATGGAGACTGAGCCGATATCCCAGGAACAACTTCCTGACAAAATGCATTGCTTAAATAGGCCTACATTTACTCGAAACGCGGAAATACTGGATTCAGGACATCAGGAATATGATTCCCAATATAATTCACCGATTCTCGCTTTGTATAAAGTCTCTCTATTGTTGTTAAGTCGTTAGAAAAGTGTGTCGAAGTCAGAATTGCTAAACGGAGCGCTGAAGGCTAGGCTAACCGTAACCAAAACATTCCAAAAAAGCAACATAAAAGCTTACGAAGTCTTATTAAAGCGCATTTGACTCAGATCTACACCAAAATGAAGATCGTTGGTTTATTTTTGTGCTTTATACTGAAAGGTGTGTTTGGTGATGAAACGTCAGTGGTGGAGGGAGATTCTGTCACGCTACATACAGATCTTACTAATATACAAGTATATGAACGTATACTGTGGACATTTGGAACAGATAACACTCGTATAGCTCAAATCAACAACGATGCCAATAAGTTCTCATTATACAATGATTTTCTCAATGGGAGATTCAGAGACAGACTGCAGCTGGATCATCAGACTGGATCTCTGACCATCACAAACATCACAACTGAACACTCTGGACTTTATGAACTACAGATCTTTGGCGGACATGAGGTCCCATCCAAAAAATTCAGAGTTATTGTTTCTGGAGTGTTTGGTGATGATACAGTGAAGACATTATCAGTGATGGAGGGAGATTCTGTTACTCTACAAACTGAAGTTACTGAATTAAAAAAAGCCGATCTGTCACTGTGGACATTTGGACCCGAAAGAACTCGTATAGCTCAAATCAACAGACAGATTAGTAAGATCTCATATTATGATGGGCTTAATAAGAGATTCAGAAACAGGCTGCATCTGGACAATCAAACGGGATCTCTGACCATCACAAACACCAGAACCGAACACACTGGAGCTTATGCATTTTTACAGATCATTGATGGAAAATATGTCCCACCCAAGAAATACAATGTTACTGTTTCTGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCCACCAGACTCAACATCTGGACATCACTCAACTCTGTCACACATGTTCAGCACCAGGTTTGTCTACAGGTTATATAATGCTGGTTTGTGTTTGTGTTCTGGCTGTGGCTGCAGGATTGTGTGGTTTTTACTATTACCATCAACGGAAGACGTCTAATCAAGCAGATCAAGGCGGCCAACCTGATGGAATAGAACTTATTGTTAGTCCAGCTAATGGTTCAGTTGTTGAAAAAGATGAAATCAAGACCTTATTAGTGATGGTAGGACAATCTCTCACTCTACACACTGATGTCACCGAAATACAGGAAAATGAGCTGATATGCTGGAAGTTTGCTGATTCCAAAGGATGCCATTGTGCTGAATTTGTTGTCATAGCTAAATGGGATAAAACCAATAATGAGGAATACTTATATAATGAAGAAAGATTCAAAGACCGTTTGAAACTGGACCACAAAACTGGATCTCTCACCATTACAAAAGTCATACCTAAACACTATGGACATTATAAACTACACATCACCAGCAACGGACAGATCATCTCAAAGACGTTCAATGTTGTTGCTCATGTGAGTTCAAAAGAAAAGAAATCGAACCCAGAGGAGAAAAACCTCTCCTGTATAATGCAAGAGGACCATAAACACTGGAATATTTGAATTCCACGGACAAAAACAAGAAACATCCTACTTTTATTATGACAAAATTCGCTAATGACAGAAGTAAAGTTGAGCATGCAACACAAGCTGACCTAAAACACAGTGTATGTTTTGTCACACCTCTATTTGTGAGGAGACAGTTTCTATTATAACCACAACAGTATTTTAAAACCGTTGGACTGTTATCACACTTGTATGAAAAGGCAAGGTGAAGCGCCTCCTGGAGTCAGTGTTATATTTGTTCTACTGTGTATAACAGCAAAAAAGGGACATTTTATATTTTCTGCATTTTTTTTTCCCGCCCTGGAAGGGCAACATACATAAAAGTATTTGCAGTTTTCACTGTATAATTAGCAAATAGTAGGCAGTTTAGTTTTTAGTAACTTTTGTAAGAACTGATAAGAATATTTTAGGACCATTGTTTTTCCAACAAAGAAAAAGTAAATCTGGGGGA
>TU184890
ACCAAAACATTCCAAAAAAGCAACATAAAAGCTTACGAAGTCTTATTAAAGCGCATTTGACTCAGATCTACACCAAAATGAAGATCGTTGGTTTATTTTTGTGCTTTATACTGAAAGGTGTGTTTGGTGATGAAACGTCAGTGGTGGAGGGAGATTCTGTCACGCTACATACAGATCTTACTAATATACAAGTATATGAACGTATACTGTGGACATTTGGAACAGATAACACTCGTATAGCTCAAATCAACAACGATGCCAATAAGTTCTCATTATACAATGATTTTCTCAATGGGAGATTCAGAGACAGACTGCAGCTGGATCATCAGACTGGATCTCTGACCATCACAAACATCACAACTGAACACTCTGGACTTTATGAACTACAGATCTTTGGCGGACATGAGGTCCCATCCAAAAAATTCAGAGTTATTGTTTCTGG

Function

NR:

description
Zgc:171601 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10738658_10751094.mRNA False 2495 mRNA 0.38 8 10738087 10751548
TU184890 True 442 TUCP 0.38 2 10738581 10740551

Neighbor

gene id symbol gene type direction distance location
CI01000030_10716988_10729316 NA coding upstream 8425 10716429 ~ 10729662 (+)
CI01000030_10689813_10702377 NA coding upstream 35094 10689448 ~ 10702993 (+)
CI01000030_10664189_10683103 MCM2, MCM2.L coding upstream 54706 10663384 ~ 10683381 (+)
CI01000030_10646148_10649874 NA coding upstream 88150 10645873 ~ 10649937 (+)
CI01000030_10642268_10643835 NA coding upstream 93773 10642268 ~ 10644314 (+)
CI01000030_10753303_10762765 NA coding downstream 1755 10753303 ~ 10762765 (+)
CI01000030_10766284_10769462 NA coding downstream 14736 10766284 ~ 10769484 (+)
CI01000030_10775818_10796010 NA coding downstream 22053 10773601 ~ 10796653 (+)
CI01000030_10860938_10862107 S1PR4 coding downstream 109220 10860768 ~ 10862292 (+)
CI01000030_10911224_10918511 NA coding downstream 156818 10908366 ~ 10918929 (+)
G162306 NA non-coding upstream 25913 10704921 ~ 10712174 (+)
G162356 NA non-coding upstream 68250 10668821 ~ 10669837 (+)
G162379 NA non-coding upstream 69411 10668399 ~ 10668676 (+)
G162365 NA non-coding upstream 87216 10650424 ~ 10650871 (+)
G162722 NA non-coding upstream 96054 10641805 ~ 10642033 (+)
G162793 NA non-coding downstream 37219 10788767 ~ 10789149 (+)
G162794 NA non-coding downstream 42262 10793810 ~ 10794162 (+)
G162795 NA non-coding downstream 42695 10794243 ~ 10794464 (+)
G162813 NA non-coding downstream 99096 10850644 ~ 10850977 (+)
G162817 NA non-coding downstream 102935 10854483 ~ 10854985 (+)
CI01000030_10473378_10509560 NA other upstream 236444 10471835 ~ 10511071 (+)
G162297 NA other upstream 516863 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 692204 10039358 ~ 10047210 (+)
G162449 NA other upstream 1381073 9356403 ~ 9357014 (+)
G162137 NA other upstream 2166361 8568010 ~ 8571726 (+)
G162821 NA other downstream 114464 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 589207 11362114 ~ 11380772 (+)
G162951 NA other downstream 741053 11492601 ~ 11496119 (+)

Expression


Co-expression Network