CI01000030_10753303_10762765


Basic Information

Item Value
gene id CI01000030_10753303_10762765
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10753303 ~ 10762765 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10753303_10762765.mRNA
ATGATCTGTGTTTTATCTTTCTGCTTTTTACTCTTGAAAGGTGTGTCTGGTGCTGAAGATGCAGTGAAGACATTATCAGTGACGGAGGGAGATTCAGTCACTCTACATGCTGGTCTTACTGAAACACAGAAAGATGATCTGATACTGTGGACATTTGGACCTGACAGCACCCGTATAGCTCAAATCAACAAAATGATCAATAAGGTCTCATTATACAATGATGCTCTTGATGGGAGATTCAGAGACAGACTGAAGCTGGATGATCAGACCGGATCTCTGACCATCACAAACACCACAAACACAGACTCTGGACTTTATAAACTACAGATCTTTGGCGGAAAAGAGGTCCCACCCAAAAAATTCAGTATTATTGTTTCTGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAACAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGACATCAGTGAACTCTGTCACACATGTGCCGTGGACTGGTCAACGTTCAAAACAGAAAGTGGTTTGCCGTTCAGTCATATAGTGCTGATCTGTGTCTTTGTTGGAGTAATTGTCCTAGTCATTGCTGCTGTTGGGATGTTTACTATCCACAGGAAATACAGAAATACAAATCAAATGGGTCAAAGTCCTGGGCAAGACATTGAGCTGAATAATGCTGATGGTGAGAAGGTCGAACTGAAGACAGTGTCAGTGATGGTGGGAAAGTCCATCACTCTAAACACCGGCGTCACCGAAATACAAAGTTTTGATGTGCTACACTGGAGGTTTGGAAAATCAGGTGCAGATGACACAAATCCGTTTGTTGTCATTGCCAGACTGAATGAACTGAACAATAGCGGTTGTTTCGATCATGATGAAAGTTTTAGAGACAGACTACAACTGGATAGA

Function

NR:

description
Zgc:171601 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10753303_10762765.mRNA True 963 mRNA 0.43 6 10753303 10762765

Neighbor

gene id symbol gene type direction distance location
CI01000030_10738658_10751094 NA coding upstream 1755 10738087 ~ 10751548 (+)
CI01000030_10716988_10729316 NA coding upstream 23641 10716429 ~ 10729662 (+)
CI01000030_10689813_10702377 NA coding upstream 50310 10689448 ~ 10702993 (+)
CI01000030_10664189_10683103 MCM2, MCM2.L coding upstream 69922 10663384 ~ 10683381 (+)
CI01000030_10646148_10649874 NA coding upstream 103366 10645873 ~ 10649937 (+)
CI01000030_10766284_10769462 NA coding downstream 3519 10766284 ~ 10769484 (+)
CI01000030_10775818_10796010 NA coding downstream 10836 10773601 ~ 10796653 (+)
CI01000030_10860938_10862107 S1PR4 coding downstream 98003 10860768 ~ 10862292 (+)
CI01000030_10911224_10918511 NA coding downstream 145601 10908366 ~ 10918929 (+)
CI01000030_10936461_10939911 NA coding downstream 173696 10936461 ~ 10940790 (+)
G162306 NA non-coding upstream 41129 10704921 ~ 10712174 (+)
G162356 NA non-coding upstream 83466 10668821 ~ 10669837 (+)
G162379 NA non-coding upstream 84627 10668399 ~ 10668676 (+)
G162365 NA non-coding upstream 102432 10650424 ~ 10650871 (+)
G162722 NA non-coding upstream 111270 10641805 ~ 10642033 (+)
G162793 NA non-coding downstream 26002 10788767 ~ 10789149 (+)
G162794 NA non-coding downstream 31045 10793810 ~ 10794162 (+)
G162795 NA non-coding downstream 31478 10794243 ~ 10794464 (+)
G162813 NA non-coding downstream 87879 10850644 ~ 10850977 (+)
G162817 NA non-coding downstream 91718 10854483 ~ 10854985 (+)
CI01000030_10473378_10509560 NA other upstream 251660 10471835 ~ 10511071 (+)
G162297 NA other upstream 532079 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 707420 10039358 ~ 10047210 (+)
G162449 NA other upstream 1396289 9356403 ~ 9357014 (+)
G162821 NA other downstream 103247 10866012 ~ 10868440 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 577990 11362114 ~ 11380772 (+)
G162951 NA other downstream 729836 11492601 ~ 11496119 (+)

Expression


Co-expression Network