CI01000030_10968005_10969830


Basic Information

Item Value
gene id CI01000030_10968005_10969830
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10967106 ~ 10970051 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10968005_10969830.mRNA
ATATAAATGTCACCTTTGGACTGTAACCATACAACAAAGAAAAGTGTGTGACTTTCATGTTAATCACATTTTTTAAACAGGATTCAATGTCATATTTGGTGCAAAATCATTAGAAACTCATAAAACGGTTGATGCTGCATAATTACAACTTGAGTATGTGCTCTTTTTGGGAACCCCTCCATACCAGATAAACCCGAAATAAACCAAAGACATGAAGAAGTATTTTCATGCTGCAGTGTGCCAGGTTATTAATTTTAAAAGTCGCATCCTCATGCGTTTTTTTTTTTTTTAGGGACTAGCCCTGCTTGTGCTGCCCCATAAAGCACTAGAGGGGGAGTCTGCCTCCCCCTGGCATCCTGCTGTAAAATCCTGGGTGTAATTGTAGCGTACTGAGGCAGAACAGGAGTAATCAGATCAGTCCCGAGGCTGGGAACATACATGGAGATACAGCATCAGCACTGGATTAAACCCCCCACCACGTCCCCCTTTACTGATTGAGGTACGATGAGTTCCTGCAAGTAGAGAGAGGGAGAGGGAGCGAGGAAAAGCCGTGAGAGGGAGTGGGAGGAAGAATGAACCAGAAAGGGAGGCAGCGCAGTGCGAGTGAGCGAGAGAGAGGGATGGGGAGGGAGTCAAAGGCAGGAAGCGAGCAACAGACAGTGGAACAGAAATGCAAGGAGTTTGAGGGAGAGGGTGGAAAACAGAGGCCGACCGCCAACGAGAGGACGACGGGAGCGAAGCAAGGTGAGAGAGAAAGAAGGGCAAGGGTCCAGAGGAAGAAAACACACCGGGATAACATCAACGGGAGGAAGCAAGACACGGGAAGGTGGGGGTCAGAGTGAAGAAACATGCAAGAGAAAGTTTGAAGGCAGGGCAGATGAGAAAAACATCTCCTGGTAATGACAAGGCCGGGGCACTTAAAGAAGGGACACATCCTCTCGAGAGTCCCCTTCTTAGGCCGCAGAATGTTCTCTGAGACAAAAGGGGTCGGGGAGCAACGCATTCAACCCACCACCCCAACCCAACTTCAACTACAAAACGGACTACAAAGACCTCAAGCTGACCTCCTTGCCTATTTTGGGAATGGGAACCATGTAACGAACACCTGTGGACCAAAGCAGCAGAATTCCCCCCTGAATGGATACACTGCCAAGCAATGTCTAGCCGTTCAGGGGGGTCATGCGCCGCAAAACGTAACTAGCCAGATTTGTCATGCCAGTGTGCAGTGGAGCCGGCCGTCAGGGAAGGGTCTGCAACATAACAGCATCTCTGTGAACTACAGCTTGAGAGAATGCAGCTTTGTGGTCCACCGGCACCAGACTGAGCCACACCCCTTCTTGAGGAAGTGTGCTCTGGACGCGCCAACACAGTTCAGAGGTCATGGAAACTGTGGAGTGCCTGTTTGTGTGGCGGAGCAACAATCAGGCTCTGTGCGAGGGGCCCTGCTTACAGAGCAACATGCATCAAACTGGATGGATGCAAGTGACACTCACAATTCGACCTTTAATAGGGAACTTTGCACTTCTAATGGACAGGGAACTTTACGTCGATGTCTGGGACATGTAATGCAAGACTTGAACGGACCTAGTCTGGTGAACGAAGCTATGCTGTCTACCAAAGATGTCAACAAACCCAATACTGTCGCCCAAGGGGATCTCAATGGACCAGGACGAGGGATTTTCAGCTCTAAGCAGTCGGAAAGAGCTATTCGGGACCAGATCCAAAGAGTTGTTGTGAATCTCGAGGAGGTTTTAACTGGCCTGAAAGAGATACATCTGGAAATGAAGGAGGTGGTCCAGAAGATAGACCTGCTGACGGCTGACATTGATATGGGCAAAGAGGAACCAGGGGACACTTTCAGAGGACGACAGTCAGGAAAGATGGACACTGAAGCGGCGTCCTCTCAAGGAGTCCACTCCGACAAGCCATCCTTCAAAACACCAACTCCATCTGTGTCTCCACCTCCATATCCCATCAGAGATCAAGGGCTGCATGAGGCAGGGCAAAAACTGGAACCCAATCAGAAGATGCTGAACTCTCAAAGACATACATCAGGGACCGCTTCAGGGCGCAGGAGCCAGAAGCCTCCTCCTTACCCTTATGCCAGCACAACGGCAAGAGTGAATCCTAAAGCAAAAGACAAAGGGCAGAAGACGCCACCCTACCCCTTTAAACGGAGACTGCTCTCGACCATTGTTTGAGCAGACCGTGGCCTTAGGATACAAAGCGGAGCATTACTCACTATATGTGGTATACCGTGTTACAGGCACCTTTCTGGTAAGTTTGGTCTTCGCTAGATCCGATAACCCAGAGTACAGCAGCAATTTATTGTCCGGAAAGTCTCTCAGACCGCAGGTGAACCATGTAATGCCTTTTTCGCTTTAGGTCTATAAAGAGGATGCGACAGAAACATCATGAACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10968005_10969830.mRNA True 2422 mRNA 0.49 2 10967106 10970051

Neighbor

gene id symbol gene type direction distance location
CI01000030_10958494_10960930 TNFAIP8L1 coding upstream 4902 10957157 ~ 10962204 (+)
CI01000030_10936461_10939911 NA coding upstream 26316 10936461 ~ 10940790 (+)
CI01000030_10911224_10918511 NA coding upstream 48177 10908366 ~ 10918929 (+)
CI01000030_10860938_10862107 S1PR4 coding upstream 104814 10860768 ~ 10862292 (+)
CI01000030_10775818_10796010 NA coding upstream 170453 10773601 ~ 10796653 (+)
CI01000030_10993343_11015527 ZFR2 coding downstream 23292 10993343 ~ 11015855 (+)
CI01000030_11017331_11024754 MATK coding downstream 47280 11017331 ~ 11025102 (+)
CI01000030_11035570_11040272 RX1, RAX2 coding downstream 65206 11035257 ~ 11041233 (+)
CI01000030_11047852_11057798 CHERP coding downstream 77711 11047762 ~ 11057798 (+)
CI01000030_11067119_11069478 NA coding downstream 96983 11067034 ~ 11069525 (+)
G162830 NA non-coding upstream 68658 10896840 ~ 10898448 (+)
G162827 NA non-coding upstream 84525 10882356 ~ 10882581 (+)
G162822 NA non-coding upstream 95926 10870534 ~ 10871180 (+)
G162819 NA non-coding upstream 110014 10856858 ~ 10857092 (+)
G162855 NA non-coding downstream 4710 10974761 ~ 10975108 (+)
G162859 NA non-coding downstream 11447 10981498 ~ 10982379 (+)
G162762 NA non-coding downstream 83222 11053273 ~ 11091871 (+)
G162875 NA non-coding downstream 133286 11103337 ~ 11103651 (+)
G162892 NA non-coding downstream 245936 11215987 ~ 11234587 (+)
G162821 NA other upstream 98666 10866012 ~ 10868440 (+)
CI01000030_10738658_10751094 NA other upstream 226555 10738087 ~ 10751548 (+)
CI01000030_10473378_10509560 NA other upstream 465463 10471835 ~ 10511071 (+)
G162297 NA other upstream 745882 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 921223 10039358 ~ 10047210 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B other downstream 370704 11362114 ~ 11380772 (+)
G162951 NA other downstream 522550 11492601 ~ 11496119 (+)

Expression


Co-expression Network