Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000030_11101642_11111505 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000030 |
| NCBI id | null |
| chromosome length | 11638347 |
| location | 11100683 ~ 11113022 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| hypothetical protein cypCar_00037883 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000030_11101642_11111505.mRNA | True | 3574 | mRNA | 0.43 | 5 | 11100683 | 11113022 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000030_11074061_11090319 | NA | coding | upstream | 10207 | 11073685 ~ 11090476 (+) |
| CI01000030_11067119_11069478 | NA | coding | upstream | 31158 | 11067034 ~ 11069525 (+) |
| CI01000030_11047852_11057798 | CHERP | coding | upstream | 42885 | 11047762 ~ 11057798 (+) |
| CI01000030_11035570_11040272 | RX1, RAX2 | coding | upstream | 59450 | 11035257 ~ 11041233 (+) |
| CI01000030_11017331_11024754 | MATK | coding | upstream | 75581 | 11017331 ~ 11025102 (+) |
| CI01000030_11114957_11124683 | NA | coding | downstream | 1846 | 11114868 ~ 11125104 (+) |
| CI01000030_11168935_11171909 | NA | coding | downstream | 55388 | 11168410 ~ 11172305 (+) |
| CI01000030_11184734_11195838 | NA | coding | downstream | 69684 | 11182706 ~ 11195865 (+) |
| CI01000030_11211094_11214554 | NA | coding | downstream | 96286 | 11209308 ~ 11214698 (+) |
| CI01000030_11278476_11281567 | NA | coding | downstream | 165374 | 11278396 ~ 11281743 (+) |
| G162762 | NA | non-coding | upstream | 8812 | 11053273 ~ 11091871 (+) |
| G162859 | NA | non-coding | upstream | 118304 | 10981498 ~ 10982379 (+) |
| G162855 | NA | non-coding | upstream | 125575 | 10974761 ~ 10975108 (+) |
| CI01000030_10911224_10918511 | NA | non-coding | upstream | 190120 | 10908366 ~ 10918929 (+) |
| G162830 | NA | non-coding | upstream | 202235 | 10896840 ~ 10898448 (+) |
| G162892 | NA | non-coding | downstream | 102965 | 11215987 ~ 11234587 (+) |
| G162891 | NA | non-coding | downstream | 112638 | 11225660 ~ 11252096 (+) |
| G162893 | NA | non-coding | downstream | 121701 | 11234723 ~ 11236919 (+) |
| G162895 | NA | non-coding | downstream | 133646 | 11246668 ~ 11253729 (+) |
| G162912 | NA | non-coding | downstream | 147126 | 11260148 ~ 11292095 (+) |
| G162821 | NA | other | upstream | 232243 | 10866012 ~ 10868440 (+) |
| CI01000030_10738658_10751094 | NA | other | upstream | 360132 | 10738087 ~ 10751548 (+) |
| CI01000030_10473378_10509560 | NA | other | upstream | 599040 | 10471835 ~ 10511071 (+) |
| G162297 | NA | other | upstream | 879459 | 10133299 ~ 10221224 (+) |
| CI01000030_10039688_10047019 | NA | other | upstream | 1054800 | 10039358 ~ 10047210 (+) |
| CI01000030_11362386_11380216 | CALR3A, CALR3, CALR3B | other | downstream | 227733 | 11362114 ~ 11380772 (+) |
| G162951 | NA | other | downstream | 379579 | 11492601 ~ 11496119 (+) |
