CI01000030_11278476_11281567


Basic Information

Item Value
gene id CI01000030_11278476_11281567
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 11278396 ~ 11281743 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_11278476_11281567.mRNA
ATATAAAGTAACTTCACGAGACACTTTTGAACATAACAACAAAGTTCAGGGTGTAAAATAGTCAGCAAAAACAAACAAAAATGGCGATGTTCACACACATCAGCACTGTCAAGTTTCACAACACTTTACTAAAAACCGCTCTCACATCAGCTCAACTGTCATTTATTACTGAAGCAGTTTTGAAGAGTTTGTCTTGGTTTCATATTTGTGTGAAGATGTTTCACACTGTTTTGTTCTGTCTGTGTTGGTGGCGTCTGGTTGATCATAGTATATTACTTAAAAAATTATGTTGTTATGGATTTGAACCAGCAGCTATTAAATGGATAGAGAGTTATCTCAGTAACCGAGAGTACACTGTGTATTTTAATGGCAGTTATTCTGAGGTTGAAGTGATGAGTTGTGGAGTGCCCCAAGATACACATAATTATTGCACTAGACAAACAGGTGTGTCTGGTGATACAGATGCAGTGAAGTCAGTGTCAGTGAAGGAGGGAGATTCAGTCACTCTAAACTCTAATCTTACTGAAATACAGAAAGATGATCTGATATTGTGGACATTTGGAACTAAAGGGCCTCTTATAGCTGTAACCAATGGAAAGACCAGTAAGATCTATGATGATTTTGATGGGAGATTCAGAGACAGACTGAAGCTGGATCATCAGACTGGATCTCTGACCATCACGAGCATCAGAAGTGAACATGCTGGAGTTTATGAAGTTCAGATCAGCGGCAGCACAAAGCCTGATATCAGATTCAGTGTTACTGTCTATAGTCTTCCTGTTTCTGTATCTCTGATAATGGTACTGATTTCTGCCACCGCCGCTGGATCTCTGCTGATTGTGGCTGTAATTGGGATGTGCAGGAAACTCGGAGATGCAGGTCAAGAATCTGAGATGACGGAGGTGATTTACACGTGTTTCACCACAGAACACTGATCAAACTCTGTGATTCTCACAAATGAAGTGATTTGTTTTCTCATTTATAGTTCCACAAAGTGATCTTTAATGAGTTTATTGTGATCCTGATAAATACTCTAGATTAACGAAGAATGCTTTAATTATTTTGTATAATGTGATTTTTTTTCTCTATATGTATCTGCCTGCCTGCATGA

Function

NR:

description
hypothetical protein cypCar_00047732, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_11278476_11281567.mRNA True 1111 mRNA 0.38 6 11278396 11281743

Neighbor

gene id symbol gene type direction distance location
CI01000030_11211094_11214554 NA coding upstream 63698 11209308 ~ 11214698 (+)
CI01000030_11184734_11195838 NA coding upstream 82531 11182706 ~ 11195865 (+)
CI01000030_11168935_11171909 NA coding upstream 106091 11168410 ~ 11172305 (+)
CI01000030_11114957_11124683 NA coding upstream 153292 11114868 ~ 11125104 (+)
CI01000030_11101642_11111505 NA coding upstream 165374 11100683 ~ 11113022 (+)
CI01000030_11289568_11298414 NA coding downstream 6127 11287870 ~ 11298477 (+)
CI01000030_11316738_11317918 NA coding downstream 34752 11316495 ~ 11317959 (+)
CI01000030_11333340_11346098 NA coding downstream 51510 11333253 ~ 11346207 (+)
CI01000030_11362386_11380216 CALR3A, CALR3, CALR3B coding downstream 80371 11362114 ~ 11380772 (+)
CI01000030_11382916_11385905 NA coding downstream 100628 11382371 ~ 11386339 (+)
G162763 NA non-coding upstream 10574 11265536 ~ 11267822 (+)
G162895 NA non-coding upstream 24667 11246668 ~ 11253729 (+)
G162891 NA non-coding upstream 26300 11225660 ~ 11252096 (+)
G162893 NA non-coding upstream 41477 11234723 ~ 11236919 (+)
G162892 NA non-coding upstream 43809 11215987 ~ 11234587 (+)
G162761 NA non-coding downstream 33859 11315602 ~ 11350125 (+)
G162954 NA non-coding downstream 109577 11391320 ~ 11391618 (+)
G162955 NA non-coding downstream 109896 11391639 ~ 11395583 (+)
G162964 NA non-coding downstream 129639 11411382 ~ 11423557 (+)
G162974 NA non-coding downstream 152052 11433795 ~ 11434026 (+)
G162821 NA other upstream 409956 10866012 ~ 10868440 (+)
CI01000030_10738658_10751094 NA other upstream 537845 10738087 ~ 10751548 (+)
CI01000030_10473378_10509560 NA other upstream 776753 10471835 ~ 10511071 (+)
G162297 NA other upstream 1057172 10133299 ~ 10221224 (+)
CI01000030_10039688_10047019 NA other upstream 1232513 10039358 ~ 10047210 (+)
G162951 NA other downstream 210858 11492601 ~ 11496119 (+)

Expression


Co-expression Network