Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000030_11333340_11346098 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000030 |
| NCBI id | null |
| chromosome length | 11638347 |
| location | 11333253 ~ 11346207 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Zgc:171887 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000030_11333340_11346098.mRNA | True | 2632 | mRNA | 0.41 | 11 | 11333253 | 11346207 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000030_11316738_11317918 | NA | coding | upstream | 15294 | 11316495 ~ 11317959 (+) |
| CI01000030_11289568_11298414 | NA | coding | upstream | 34776 | 11287870 ~ 11298477 (+) |
| CI01000030_11278476_11281567 | NA | coding | upstream | 51510 | 11278396 ~ 11281743 (+) |
| CI01000030_11211094_11214554 | NA | coding | upstream | 118555 | 11209308 ~ 11214698 (+) |
| CI01000030_11184734_11195838 | NA | coding | upstream | 137388 | 11182706 ~ 11195865 (+) |
| CI01000030_11362386_11380216 | CALR3A, CALR3, CALR3B | coding | downstream | 15907 | 11362114 ~ 11380772 (+) |
| CI01000030_11382916_11385905 | NA | coding | downstream | 36164 | 11382371 ~ 11386339 (+) |
| CI01000030_11437923_11444045 | NA | coding | downstream | 91420 | 11437627 ~ 11444049 (+) |
| CI01000030_11464522_11490298 | FBN2B | coding | downstream | 118315 | 11464522 ~ 11490628 (+) |
| CI01000030_11550703_11555403 | UHRF1 | coding | downstream | 204496 | 11550703 ~ 11555596 (+) |
| G162912 | NA | non-coding | upstream | 41158 | 11260148 ~ 11292095 (+) |
| G162763 | NA | non-coding | upstream | 65431 | 11265536 ~ 11267822 (+) |
| G162895 | NA | non-coding | upstream | 79524 | 11246668 ~ 11253729 (+) |
| G162891 | NA | non-coding | upstream | 81157 | 11225660 ~ 11252096 (+) |
| G162893 | NA | non-coding | upstream | 96334 | 11234723 ~ 11236919 (+) |
| G162954 | NA | non-coding | downstream | 45113 | 11391320 ~ 11391618 (+) |
| G162955 | NA | non-coding | downstream | 45432 | 11391639 ~ 11395583 (+) |
| G162964 | NA | non-coding | downstream | 65175 | 11411382 ~ 11423557 (+) |
| G162974 | NA | non-coding | downstream | 87588 | 11433795 ~ 11434026 (+) |
| G162975 | NA | non-coding | downstream | 87841 | 11434048 ~ 11434264 (+) |
| G162821 | NA | other | upstream | 464813 | 10866012 ~ 10868440 (+) |
| CI01000030_10738658_10751094 | NA | other | upstream | 592702 | 10738087 ~ 10751548 (+) |
| CI01000030_10473378_10509560 | NA | other | upstream | 831610 | 10471835 ~ 10511071 (+) |
| G162297 | NA | other | upstream | 1112029 | 10133299 ~ 10221224 (+) |
| CI01000030_10039688_10047019 | NA | other | upstream | 1287370 | 10039358 ~ 10047210 (+) |
| G162951 | NA | other | downstream | 146394 | 11492601 ~ 11496119 (+) |
