G157079


Basic Information

Item Value
gene id G157079
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 40449 ~ 40692 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178354
TTATTAAAGCAATAATGGGAGGAAGTGTGTTCTGTAATACAAAGCGAAGCTGACCAAAACCCCCCTTGACTATTGTTAAATCACTGTAATGTACAGCCTCTTGTGTCATATTTCTATTAATAAATGGCTGCAACAGGAGTATCATAAAAGACACCAGTGTTTTATAATGGCAATATTCTACTGCCAAGTAATAAACTACATTAGCCAAACTATTTAGTATTCATTTTCTAAGCATAAACCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178354 True 244 lncRNA 0.34 1 40449 40692

Neighbor

gene id symbol gene type direction distance location
CI01000030_00023913_00029855 BZW1, BZW1A coding upstream 9914 23913 ~ 30535 (+)
CI01000030_00476829_00484029 GTPBP1, GTPBP1L, GTPB1 coding downstream 436137 476829 ~ 484029 (+)
CI01000030_00753779_00759287 NA coding downstream 713039 753731 ~ 759320 (+)
CI01000030_00760361_00762546 NA coding downstream 719669 760361 ~ 762817 (+)
CI01000030_00811105_00836626 GPC5B coding downstream 770413 811105 ~ 836748 (+)
CI01000030_00857611_00858359 NA coding downstream 816778 857470 ~ 858858 (+)
G157078 NA non-coding upstream 13472 26497 ~ 26977 (+)
G157080 NA non-coding downstream 670 41362 ~ 41576 (+)
G157127 NA non-coding downstream 112914 153606 ~ 153885 (+)
G157129 NA non-coding downstream 117220 157912 ~ 158188 (+)
G157130 NA non-coding downstream 118629 159321 ~ 159639 (+)
G157133 NA non-coding downstream 123237 163929 ~ 164210 (+)
G157076 NA other upstream 22693 12878 ~ 17756 (+)
G157108 NA other downstream 75464 116156 ~ 146853 (+)
G157227 NA other downstream 286957 327649 ~ 356483 (+)
CI01000030_01003310_01003776 NA other downstream 962585 1003114 ~ 1003795 (+)
G157726 NA other downstream 1596175 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 2238421 2277208 ~ 2282743 (+)

Expression


Co-expression Network