G157129


Basic Information

Item Value
gene id G157129
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 157912 ~ 158188 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178406
TGAAAATTTTCCATCCATCAATGTCTGATATACAAACCCGATTCCAAAAAAGTTGGGACACTGTACAAATTGTGAATAAAAAAGGAATGCAATAATTTACAAATCTCATAAACTTATATTTTATTCACAATAGAATATAGATAACATATCAAATGTTGAAAGTGAGACATTTTGAAATATCATGCCAAATATTGGCTCATTTTGGATTTCATGAGAGCTACACATTCCAAAAAAGTTGGGACAGGTAGCAATAAGAGGCCGGAAAAGTTAAATGNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178406 True 277 lncRNA 0.30 1 157912 158188

Neighbor

gene id symbol gene type direction distance location
CI01000030_00023913_00029855 BZW1, BZW1A coding upstream 127377 23913 ~ 30535 (+)
CI01000030_00476829_00484029 GTPBP1, GTPBP1L, GTPB1 coding downstream 318641 476829 ~ 484029 (+)
CI01000030_00753779_00759287 NA coding downstream 595543 753731 ~ 759320 (+)
CI01000030_00760361_00762546 NA coding downstream 602173 760361 ~ 762817 (+)
CI01000030_00811105_00836626 GPC5B coding downstream 652917 811105 ~ 836748 (+)
CI01000030_00857611_00858359 NA coding downstream 699282 857470 ~ 858858 (+)
G157127 NA non-coding upstream 4027 153606 ~ 153885 (+)
G157080 NA non-coding upstream 116336 41362 ~ 41576 (+)
G157079 NA non-coding upstream 117220 40449 ~ 40692 (+)
G157078 NA non-coding upstream 130935 26497 ~ 26977 (+)
G157130 NA non-coding downstream 1133 159321 ~ 159639 (+)
G157133 NA non-coding downstream 5741 163929 ~ 164210 (+)
G157138 NA non-coding downstream 17904 176092 ~ 176337 (+)
G157140 NA non-coding downstream 19997 178185 ~ 178389 (+)
G157125 NA non-coding downstream 22756 180944 ~ 182355 (+)
G157108 NA other upstream 11059 116156 ~ 146853 (+)
G157076 NA other upstream 140156 12878 ~ 17756 (+)
G157227 NA other downstream 169461 327649 ~ 356483 (+)
CI01000030_01003310_01003776 NA other downstream 845089 1003114 ~ 1003795 (+)
G157726 NA other downstream 1478679 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 2120925 2277208 ~ 2282743 (+)
G158416 NA other downstream 2437688 2595876 ~ 2614293 (+)

Expression


Co-expression Network