G157130



Basic Information


Item Value
gene id G157130
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 159321 ~ 159639 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU178407
ACAACATTCCTATTCCTAAACTTGAGCAACTTGTCTCCTCAGTCCCCAGACGTTTGCAGACTGTTATAAAAAGAAGAGGGGATGCCACACAGTGGTAAACAAGGCCTTGTCCCAACTTTTTTGAGATGTGTTGATGCCATGAAATTTAAAATCAACTTATTTTTCCATTAAAATGATACATTTTCTCAGTTTAAACATTTGATATGTCATCTATGTTGTATTCTGAATAAAATATTGAAATTTGAAACTTCCACATCATTGCATTCTTTTTTATTCACAATTTGTACAGTGTCCCAACTTTTTTGGAATCGGGTTTGTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU178407 True 319 lncRNA 0.34 1 159321 159639

Neighbor


gene id symbol gene type direction distance location
CI01000030_00023913_00029855 BZW1, BZW1A coding upstream 128786 23913 ~ 30535 (+)
CI01000030_00476829_00484029 GTPBP1, GTPBP1L, GTPB1 coding downstream 317190 476829 ~ 484029 (+)
CI01000030_00753779_00759287 NA coding downstream 594092 753731 ~ 759320 (+)
CI01000030_00760361_00762546 NA coding downstream 600722 760361 ~ 762817 (+)
CI01000030_00811105_00836626 GPC5B coding downstream 651466 811105 ~ 836748 (+)
CI01000030_00857611_00858359 NA coding downstream 697831 857470 ~ 858858 (+)
G157129 NA non-coding upstream 1133 157912 ~ 158188 (+)
G157127 NA non-coding upstream 5436 153606 ~ 153885 (+)
G157080 NA non-coding upstream 117745 41362 ~ 41576 (+)
G157079 NA non-coding upstream 118629 40449 ~ 40692 (+)
G157078 NA non-coding upstream 132344 26497 ~ 26977 (+)
G157133 NA non-coding downstream 4290 163929 ~ 164210 (+)
G157138 NA non-coding downstream 16453 176092 ~ 176337 (+)
G157140 NA non-coding downstream 18546 178185 ~ 178389 (+)
G157125 NA non-coding downstream 21305 180944 ~ 182355 (+)
G157145 NA non-coding downstream 33726 193365 ~ 193668 (+)
G157108 NA other upstream 12468 116156 ~ 146853 (+)
G157076 NA other upstream 141565 12878 ~ 17756 (+)
G157227 NA other downstream 168010 327649 ~ 356483 (+)
CI01000030_01003310_01003776 NA other downstream 843638 1003114 ~ 1003795 (+)
G157726 NA other downstream 1477228 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 2119474 2277208 ~ 2282743 (+)
G158416 NA other downstream 2436237 2595876 ~ 2614293 (+)

Expression



Co-expression Network