G157125


Basic Information

Item Value
gene id G157125
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 180944 ~ 182355 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178402
AAAATAATGAAATTGTTGGTTAGCACTTTTTAAAACTTAAAACATATATGAATTTGTCAAGTGTGTGGAAAAACTCTCTTCATCTAGTTCACCGCTTCTATGACATTTACAGTTATTTATTTGTTTATTTCAAGTCTTTATATGTTTTCTGTGGTTAAGGATTAGTGCAAGGTCGAACAATAATGAAAAAACAAAATAATCAAATTAATGTTGAAATAATGCATGTCCTTTTTTTGGTAATACGATAAAACCCTTTTTTTTTTTTGACAAAAAAAAAGGTTGTGAAAAAGTACTGAAAGTAATACATTTAAATAGATATTTGCATGTTCTTCACATCATGTTATATGCAAACCTGCATTGAGCACGTTTCACTTTCATTTTTATTTCAAGTGAGTCTCTTTAATCTCATGGTATGGAAACACTGCCAGATATGTCACTTTCTTTTTTTCTCCATTCAAACATCCGTTTCCGCTTCACAGATACAGACTGTTCTGAGCAAATAATTTCACAATAAGATTAAAGAGAGACTTACTATAAAAAAAATGCACACATGCAAAATATTTACCTTTGTTTATCTGAAGGTGAAAATATAAATATACAAATATACAATTACTCTTTCGAAGTGAACATAAATGGAACGTTTGAACCCAAGTTCAACTATTAATTTTTCTGCAGCTTCTGAAGGATCTGTATTTTTTTTAGACAATTTTTTTTAAGACAAAAGTAGTTTAAAGCTTTTAAAGTAATCTGAGGGCATATAGTTTTGGTTAAGGAAGAGAGTAACAATTTAATCTGTCAATTTACGGGAAAAGCAGAACTGGAGCCGCATTTGTGACCGATCGTTTCGCTAGATAAGACCCTTATTTCTCGTCTGGTATGGTTTAAAGCCATTTGAAGCTGCACTGAAACTGTAATTTTGACCTTCAACTGTTCGAGGCCAATTGAAGTCCACTATAAGGAGAATAATCCTGGAATGTTTTCATCAAAAATCTTAATTTCTTTTTGAATGAAGAAAGAAGGACATGGACAACTTGGATGACATGGGGCAGAACTCCTTGACTCTTGCTGTCCCGTTGTACCAGAACTCCCTGGCACTTGCTGTTCCAGTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178402 True 1111 lncRNA 0.33 2 180944 182355

Neighbor

gene id symbol gene type direction distance location
CI01000030_00023913_00029855 BZW1, BZW1A coding upstream 150409 23913 ~ 30535 (+)
CI01000030_00476829_00484029 GTPBP1, GTPBP1L, GTPB1 coding downstream 294474 476829 ~ 484029 (+)
CI01000030_00753779_00759287 NA coding downstream 571376 753731 ~ 759320 (+)
CI01000030_00760361_00762546 NA coding downstream 578006 760361 ~ 762817 (+)
CI01000030_00811105_00836626 GPC5B coding downstream 628750 811105 ~ 836748 (+)
CI01000030_00857611_00858359 NA coding downstream 675115 857470 ~ 858858 (+)
G157140 NA non-coding upstream 2555 178185 ~ 178389 (+)
G157138 NA non-coding upstream 4607 176092 ~ 176337 (+)
G157133 NA non-coding upstream 16734 163929 ~ 164210 (+)
G157130 NA non-coding upstream 21305 159321 ~ 159639 (+)
G157129 NA non-coding upstream 22756 157912 ~ 158188 (+)
G157145 NA non-coding downstream 11010 193365 ~ 193668 (+)
G157149 NA non-coding downstream 15188 197543 ~ 197976 (+)
G157192 NA non-coding downstream 76152 258507 ~ 263669 (+)
G157201 NA non-coding downstream 91602 273957 ~ 277116 (+)
G157243 NA non-coding downstream 190004 372359 ~ 392298 (+)
G157108 NA other upstream 34091 116156 ~ 146853 (+)
G157076 NA other upstream 163188 12878 ~ 17756 (+)
G157227 NA other downstream 145294 327649 ~ 356483 (+)
CI01000030_01003310_01003776 NA other downstream 820922 1003114 ~ 1003795 (+)
G157726 NA other downstream 1454512 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 2096758 2277208 ~ 2282743 (+)
G158416 NA other downstream 2413521 2595876 ~ 2614293 (+)

Expression


Co-expression Network