G157201


Basic Information

Item Value
gene id G157201
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 273957 ~ 277116 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178494
GTTGATTGGCAGCTCGTCTGATTGGTCCAGACAGTCGGGGAAGCCATCACATTCCCATTGGGCTCTCAATAAACACCGCCCATCCGCACAGCGGAACTCCTCTTCTTTGCATAGACGGTACTCGCATTCAAGAGACTCATCAGAACCATCTCCGCAGTCGTCGTCATGGTCACACACAAAACGCCGCGGGACGCAGTTCTGGTTCCGACACTGGAATGTGCTCTCAGTGCACGTGTTGTTTGGAGCACAGCCAGCTACTGCTAGTTCATCGCTGCCATCAGGACAATCTCTCTCCCCGTCGCATAACCAGTTCCTGGGTACACAAGCGTATGATCCTGGGCAACTGAACAAGCCAGGGGCGCATGTTGCTGAGCCTGCCGAGAGAGAGAATCAGAAAGAGAGAGATCTCAAGCCAACATGCTGCGATGTCATTAATGAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178494 True 441 lncRNA 0.53 3 273957 277116

Neighbor

gene id symbol gene type direction distance location
CI01000030_00023913_00029855 BZW1, BZW1A coding upstream 243422 23913 ~ 30535 (+)
CI01000030_00476829_00484029 GTPBP1, GTPBP1L, GTPB1 coding downstream 199713 476829 ~ 484029 (+)
CI01000030_00753779_00759287 NA coding downstream 476615 753731 ~ 759320 (+)
CI01000030_00760361_00762546 NA coding downstream 483245 760361 ~ 762817 (+)
CI01000030_00811105_00836626 GPC5B coding downstream 533989 811105 ~ 836748 (+)
CI01000030_00857611_00858359 NA coding downstream 580354 857470 ~ 858858 (+)
G157192 NA non-coding upstream 10288 258507 ~ 263669 (+)
G157149 NA non-coding upstream 75981 197543 ~ 197976 (+)
G157145 NA non-coding upstream 80289 193365 ~ 193668 (+)
G157125 NA non-coding upstream 91602 180944 ~ 182355 (+)
G157140 NA non-coding upstream 95568 178185 ~ 178389 (+)
G157243 NA non-coding downstream 95243 372359 ~ 392298 (+)
G157245 NA non-coding downstream 104331 381447 ~ 381979 (+)
G157250 NA non-coding downstream 118688 395804 ~ 471388 (+)
G157255 NA non-coding downstream 213984 491100 ~ 492540 (+)
G157281 NA non-coding downstream 222378 499494 ~ 499878 (+)
G157108 NA other upstream 127104 116156 ~ 146853 (+)
G157076 NA other upstream 256201 12878 ~ 17756 (+)
G157227 NA other downstream 50533 327649 ~ 356483 (+)
CI01000030_01003310_01003776 NA other downstream 726161 1003114 ~ 1003795 (+)
G157726 NA other downstream 1359751 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 2001997 2277208 ~ 2282743 (+)
G158416 NA other downstream 2318760 2595876 ~ 2614293 (+)

Expression


Co-expression Network