G157227


Basic Information

Item Value
gene id G157227
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 327649 ~ 356483 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178522
GTTTTATTTGAGTTAAAACATTCAGAGATATGTTTCTTTTTACCTTTCTGACTGTCTTTATCATACACTTTGATGTGGACCACGCCTGTGGTCTTATTCCGAAGAACCGTCAGGTTTTTTCCGTCCCTCTTGTTAATAATCCCCAGCTGAGCGAGAACATCGTCCGCCCACCATAACTTCCCACCCATCACTGCTAATGCCGTGGCTTTCCGTAGCTCTTTTTTTAAGCTGTCAATCACGTCCAGGCCACTCCCATCCAGGTTACATCTATTAATGGTTCCGTTTCCGGAACTTATCCAGTACAGCTTGTTGGCCGAGTAGTCAATCGACAGCCCAACAGGCTCCTTCTGGTTCTGGTGCAAAATCTTGATGTTACTGCCATCCATGTTTGCCATATTTATTGTGCCCCCGTCCATCCAGAACATCTTCCCTTTAGACGGATGCAGAACGAGACACTTGGGCTTGTCCATGCCGTGAACGACGGTGGTTTTAAGAGATCCGTCAAGACGGGCGACATTAATGTGGGTCTCATCGTTGTCTGAGCTCATCCAGTACATGTTTCTGGACAGCCAATCAATAGCCAGGCCACGGACATTGGAGAGATCTCCAGACATGACTGTTTCGAGTTTGGTTCCGTTAATGAACGCTCGTTTTATAGTTCGGGTCTTCACATCAGCCCAGTAAATCCTCTCATTTATGGCATCGTAATCCACCGCCGTGACATCGTCAATATCGGGTACAGTGAAGGCCATGATGACGTTGAGGTACGGGTTGTCTATGTCCACTCCTCGAATCTCGGATCTCCGAGCGTATAACAGAAATTTCTTCACGACTTGGCAGGTTCGGTTGTTGGCCGACAGTTTCATGAGATGTGGACAGGAGCAAGACGCAGAACCATTATAATTTATAAGACAGAGGTGAGAACATTGGCCTCTTCCCTTGTTACCATCACATGGATTAGGAGTTTGTGGCTGCCTGCTGGGATGGTAAATCTCCAGGTCGAAGGGTTGGGCACTGGTTTTTTGGATCACTGTCACATTGGCTCCAGTCCATTTGTTGGCTTTAGTCAATGTGTTGGTCCTCCAGTCGGTCCAATAGACGTTCCCTCCAAAGAGAGACACGGCAAAGGGGTGAGAGAGGAATTCGTGTCCTCGAAGAATTTCAATCACCCCCGTGCCGTCATATAGAGCTGAGTATATCGCGTCAGATCGGGCATCTGTCCATACTATCCTGCTCTCCATGTGATCCAAGGTGAGCCCATTGGGCCAGGCGCCGGTGTCCATGTCCTTGAAAACCACATGTCGCCGTTTCCCGCTCATGGAAGCGCCTTCAATACGAGGAAACGTGGCATCCCAATCGGTCCAGAACAGGGCACCCTGGCCGGGGTCCACGGCAATCGCCCGAGGGTGTTCCATACCCCCAGCGATCAGGGTGGTCCGTAATTCGCCGTTCAGCTTGGACACCTCAATCTGGTCCAGGTTACTGTCGATCCAATAGAGATTTCCTGCTATCCAATCAACAGCAAGACCCTCTGGAGTGGCTAGACCATGTTGGACCACCACCTCAATCGCTGAAACACCTCCACTCTCAGACAGCTTCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178522 True 1602 TUCP 0.50 10 327649 356483

Neighbor

gene id symbol gene type direction distance location
CI01000030_00023913_00029855 BZW1, BZW1A coding upstream 297114 23913 ~ 30535 (+)
CI01000030_00476829_00484029 GTPBP1, GTPBP1L, GTPB1 coding downstream 120346 476829 ~ 484029 (+)
CI01000030_00753779_00759287 NA coding downstream 397248 753731 ~ 759320 (+)
CI01000030_00760361_00762546 NA coding downstream 403878 760361 ~ 762817 (+)
CI01000030_00811105_00836626 GPC5B coding downstream 454622 811105 ~ 836748 (+)
CI01000030_00857611_00858359 NA coding downstream 500987 857470 ~ 858858 (+)
G157201 NA non-coding upstream 50533 273957 ~ 277116 (+)
G157192 NA non-coding upstream 63980 258507 ~ 263669 (+)
G157149 NA non-coding upstream 129673 197543 ~ 197976 (+)
G157145 NA non-coding upstream 133981 193365 ~ 193668 (+)
G157125 NA non-coding upstream 145294 180944 ~ 182355 (+)
G157243 NA non-coding downstream 15876 372359 ~ 392298 (+)
G157245 NA non-coding downstream 24964 381447 ~ 381979 (+)
G157250 NA non-coding downstream 39321 395804 ~ 471388 (+)
G157255 NA non-coding downstream 134617 491100 ~ 492540 (+)
G157281 NA non-coding downstream 143011 499494 ~ 499878 (+)
G157108 NA other upstream 180796 116156 ~ 146853 (+)
G157076 NA other upstream 309893 12878 ~ 17756 (+)
CI01000030_01003310_01003776 NA other downstream 646794 1003114 ~ 1003795 (+)
G157726 NA other downstream 1280384 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1922630 2277208 ~ 2282743 (+)
G158416 NA other downstream 2239393 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 2656973 3018776 ~ 3043773 (+)

Expression


Co-expression Network