G157245



Basic Information


Item Value
gene id G157245
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 381447 ~ 381979 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU178546
GAAAACTTTTTGAATTTGAAGATCAAGGTAAATTGTACTTAATTTGTCTCCGGGAAACATGTAGGTATCTTCTGTTGCTTCCAAAATGCAGTACTAAATGAAGAAAATTGATATTTAAACAAAATAAGAAAAATTTGGACATCTTCATCCTGTTCAAAAGTTTTCACCCCTGACTCTTAATGCACCGTGTTTCCTTCTGGAGCATCAGTGAATGTTTGAACCTTTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU178546 True 226 lncRNA 0.33 2 381447 381979

Neighbor


gene id symbol gene type direction distance location
CI01000030_00023913_00029855 BZW1, BZW1A coding upstream 350912 23913 ~ 30535 (+)
CI01000030_00476829_00484029 GTPBP1, GTPBP1L, GTPB1 coding downstream 94850 476829 ~ 484029 (+)
CI01000030_00753779_00759287 NA coding downstream 371752 753731 ~ 759320 (+)
CI01000030_00760361_00762546 NA coding downstream 378382 760361 ~ 762817 (+)
CI01000030_00811105_00836626 GPC5B coding downstream 429126 811105 ~ 836748 (+)
CI01000030_00857611_00858359 NA coding downstream 475491 857470 ~ 858858 (+)
G157201 NA non-coding upstream 104331 273957 ~ 277116 (+)
G157192 NA non-coding upstream 117778 258507 ~ 263669 (+)
G157149 NA non-coding upstream 183471 197543 ~ 197976 (+)
G157145 NA non-coding upstream 187779 193365 ~ 193668 (+)
G157125 NA non-coding upstream 199092 180944 ~ 182355 (+)
G157250 NA non-coding downstream 13825 395804 ~ 471388 (+)
G157255 NA non-coding downstream 109121 491100 ~ 492540 (+)
G157281 NA non-coding downstream 117515 499494 ~ 499878 (+)
G157292 NA non-coding downstream 128111 510090 ~ 510325 (+)
G157294 NA non-coding downstream 129383 511362 ~ 511706 (+)
G157227 NA other upstream 24964 327649 ~ 356483 (+)
G157108 NA other upstream 234594 116156 ~ 146853 (+)
G157076 NA other upstream 363691 12878 ~ 17756 (+)
CI01000030_01003310_01003776 NA other downstream 621298 1003114 ~ 1003795 (+)
G157726 NA other downstream 1254888 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1897134 2277208 ~ 2282743 (+)
G158416 NA other downstream 2213897 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 2631477 3018776 ~ 3043773 (+)

Expression



Co-expression Network