G157250


Basic Information

Item Value
gene id G157250
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 395804 ~ 471388 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178551
GCCTTGGATGATAGTGTGTCTGTTTTTGCCATTGTAATCCACAACTTCGATAAAATCCAGATAAGCGTCCGCCCAGTAGACAAGCTTCTTGACCAAGTCCAATGTCACGGCGGTCGGCTGTTCGGTTTTATACTCCACTATCCTGGTTCGGTTGGTGCCATCCATGTTGCAGCGCTCCACTTTGGCTATTGTCCCGTAGTCCGTGAAAAACAGTTTTCCCATGATGGGATCCAGCACGAGGCCTTTGGGGTTCTGGATGTCCAGGTCAATGATGGTGACACATGCATCTCCCTGTTCACTGCACACAAATATCCGGTCGTTCACTCTGTCTACGAAGTAGAAGTTTCCTGTTAACCAGTCGATGGCCATATGCTCCACATTTTGTAGGTTCTGACCTATCCGTATCTCATGTTTTTCTGAAAACCCTTTGAGTTTGGTCATGCGGGCACACCACAGTTGACCTGTATCCTGCGCCACTGAAAGCCAACAGAGTGACTCTTCTCTATAAATAAAGTCCAATATTTGAGTCCCATTTGTCTCCATGGACTTGAGATTTGGCATAGATGATCCATTGAGGTAAACAACTGATATAGAATTCATATTTGTTGTCAACAGAACCGGAGGTTTATCGCCAGGATCTGTTTTGGCTTTGCAGGATCGTCTGTTGGCCTGCAGGCTGAAGCCATCTGTGCAAGCGCATCTGTATGATCCCTGCGTGTTCATACAGATCTGACTGCATGTCCCGTAATCCCTGCATTCATCATGATCTCGACATCGTCTCCCGTCCTCGTCTAGTTCGAAACCTTCCCCGCAGAAACAGGACGTCCCGTTTCTCATGATCACACAGTCAAACTGACACCTCCGCTCCTGGCAGCTGCGCACCAACTCGCGGCAGTGCACTCCCTCGTCGTAACCGTCCTCACAGTCCCGTACTCCATTGCAGAGTTTACTATAATGAACACACCTGTGGGTGCCGAGGCACTGGAGGTGATTGACGGGACATCTCACCTTTACCTGCCGCAAGCCTTGCTCAACTCCAGCCACTGTCAGCGTTTTAACCAGCAGAATTAATCCCGACATGCTCAGAAATGCCAAAATAAAGTCGGACATCGTGGCTGGATGTAGTCCCGAGCAGATCCGTTATCCGCCAGCGCCGATGATGATGATGATGATGCCCAAGTTGAGTGTGAGCGAAGCCGGTCTCACGCCCCGCAGCGCTCCGCTCCGCAGCGCAGCTCCTCCCGCAGGTGTGTGTGCGTGCGTGTGTGACTGTACGGACAACACGGACTGCGTGCGCCTCCGTTTGAGGATAACGAGGTAGGATGGTAGGGAGAGAGGGAGAGACGGG

Function

NR:

description
transposase-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178551 True 1348 lncRNA 0.51 7 395804 471388

Neighbor

gene id symbol gene type direction distance location
CI01000030_00023913_00029855 BZW1, BZW1A coding upstream 365269 23913 ~ 30535 (+)
CI01000030_00476829_00484029 GTPBP1, GTPBP1L, GTPB1 coding downstream 5441 476829 ~ 484029 (+)
CI01000030_00753779_00759287 NA coding downstream 282343 753731 ~ 759320 (+)
CI01000030_00760361_00762546 NA coding downstream 288973 760361 ~ 762817 (+)
CI01000030_00811105_00836626 GPC5B coding downstream 339717 811105 ~ 836748 (+)
CI01000030_00857611_00858359 NA coding downstream 386082 857470 ~ 858858 (+)
G157243 NA non-coding upstream 3506 372359 ~ 392298 (+)
G157245 NA non-coding upstream 13825 381447 ~ 381979 (+)
G157201 NA non-coding upstream 118688 273957 ~ 277116 (+)
G157192 NA non-coding upstream 132135 258507 ~ 263669 (+)
G157149 NA non-coding upstream 197828 197543 ~ 197976 (+)
G157255 NA non-coding downstream 19712 491100 ~ 492540 (+)
G157281 NA non-coding downstream 28106 499494 ~ 499878 (+)
G157292 NA non-coding downstream 38702 510090 ~ 510325 (+)
G157294 NA non-coding downstream 39974 511362 ~ 511706 (+)
G157301 NA non-coding downstream 54595 525983 ~ 526236 (+)
G157227 NA other upstream 39321 327649 ~ 356483 (+)
G157108 NA other upstream 248951 116156 ~ 146853 (+)
G157076 NA other upstream 378048 12878 ~ 17756 (+)
CI01000030_01003310_01003776 NA other downstream 531889 1003114 ~ 1003795 (+)
G157726 NA other downstream 1165479 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1807725 2277208 ~ 2282743 (+)
G158416 NA other downstream 2124488 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 2542068 3018776 ~ 3043773 (+)

Expression


Co-expression Network