G157292


Basic Information

Item Value
gene id G157292
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 510090 ~ 510325 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178604
ATGATACTCAGCTCTATATTTCTTCGCGCCCTGACGAAACTTACCAATTCACAAAATTAATGGAATGCATAGCTGATATAAAAAATTGGATGACCAGTAATTTCCTACTACTAAATTCAGAAAAAAACAGAGATTCTAATTATTGGACCAAAAACCTCTGCACGTAATAACCTAGAATATTGTCTAACACTTGATTGCTGCTCTGTTAAGTCTCCTTCATCAGTTAGGAACCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178604 True 236 lncRNA 0.36 1 510090 510325

Neighbor

gene id symbol gene type direction distance location
CI01000030_00476829_00484029 GTPBP1, GTPBP1L, GTPB1 coding upstream 26061 476829 ~ 484029 (+)
CI01000030_00023913_00029855 BZW1, BZW1A coding upstream 479555 23913 ~ 30535 (+)
CI01000030_00753779_00759287 NA coding downstream 243406 753731 ~ 759320 (+)
CI01000030_00760361_00762546 NA coding downstream 250036 760361 ~ 762817 (+)
CI01000030_00811105_00836626 GPC5B coding downstream 300780 811105 ~ 836748 (+)
CI01000030_00857611_00858359 NA coding downstream 347145 857470 ~ 858858 (+)
CI01000030_00873074_00886771 GPC1A coding downstream 361619 871944 ~ 886807 (+)
G157281 NA non-coding upstream 10212 499494 ~ 499878 (+)
G157255 NA non-coding upstream 17550 491100 ~ 492540 (+)
G157250 NA non-coding upstream 38702 395804 ~ 471388 (+)
G157243 NA non-coding upstream 117792 372359 ~ 392298 (+)
G157245 NA non-coding upstream 128111 381447 ~ 381979 (+)
G157294 NA non-coding downstream 1037 511362 ~ 511706 (+)
G157301 NA non-coding downstream 15658 525983 ~ 526236 (+)
G157303 NA non-coding downstream 30565 540890 ~ 541196 (+)
G157313 NA non-coding downstream 66822 577147 ~ 583433 (+)
G157314 NA non-coding downstream 73299 583624 ~ 583880 (+)
G157227 NA other upstream 153607 327649 ~ 356483 (+)
G157108 NA other upstream 363237 116156 ~ 146853 (+)
G157076 NA other upstream 492334 12878 ~ 17756 (+)
CI01000030_01003310_01003776 NA other downstream 492952 1003114 ~ 1003795 (+)
G157726 NA other downstream 1126542 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1768788 2277208 ~ 2282743 (+)
G158416 NA other downstream 2085551 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 2503131 3018776 ~ 3043773 (+)

Expression


Co-expression Network