G157403


Basic Information

Item Value
gene id G157403
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 800910 ~ 801144 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178729
CATAAATATGCAACGGCATTGAGCATCCAAGATTGGAAGCGCAATACACGGAGAGGTCGTGCACACAAATTTGAATAATTCATGTATGCGAAGAGAAGCTTTTTGTTTTCATCAGAAACTATCAAAACCTTTATGCCCAGCATGGGATATATGCGCGACCCTGAGATCAAGAGACTCACACAGATCAACTGACTGGAAAAAACACCACAGCCTTAGAAGTTGAGTGAAAAAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178729 True 235 lncRNA 0.41 1 800910 801144

Neighbor

gene id symbol gene type direction distance location
CI01000030_00760361_00762546 NA coding upstream 38093 760361 ~ 762817 (+)
CI01000030_00753779_00759287 NA coding upstream 41590 753731 ~ 759320 (+)
CI01000030_00476829_00484029 GTPBP1, GTPBP1L, GTPB1 coding upstream 316881 476829 ~ 484029 (+)
CI01000030_00023913_00029855 BZW1, BZW1A coding upstream 770375 23913 ~ 30535 (+)
CI01000030_00811105_00836626 GPC5B coding downstream 9961 811105 ~ 836748 (+)
CI01000030_00857611_00858359 NA coding downstream 56326 857470 ~ 858858 (+)
CI01000030_00873074_00886771 GPC1A coding downstream 70800 871944 ~ 886807 (+)
CI01000030_00937645_00942188 LPL coding downstream 136501 937645 ~ 942822 (+)
CI01000030_00945680_00950479 NA coding downstream 144536 945680 ~ 950916 (+)
G157314 NA non-coding upstream 217030 583624 ~ 583880 (+)
G157313 NA non-coding upstream 217477 577147 ~ 583433 (+)
G157303 NA non-coding upstream 259714 540890 ~ 541196 (+)
G157301 NA non-coding upstream 274674 525983 ~ 526236 (+)
G157294 NA non-coding upstream 289204 511362 ~ 511706 (+)
G157349 NA non-coding downstream 86664 887808 ~ 889035 (+)
G157431 NA non-coding downstream 95723 896867 ~ 897416 (+)
G157338 NA non-coding downstream 107861 909005 ~ 925002 (+)
G157336 NA non-coding downstream 116985 918129 ~ 921555 (+)
G157438 NA non-coding downstream 131539 932683 ~ 933112 (+)
G157227 NA other upstream 444427 327649 ~ 356483 (+)
G157108 NA other upstream 654057 116156 ~ 146853 (+)
G157076 NA other upstream 783154 12878 ~ 17756 (+)
CI01000030_01003310_01003776 NA other downstream 202133 1003114 ~ 1003795 (+)
G157726 NA other downstream 835723 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1477969 2277208 ~ 2282743 (+)
G158416 NA other downstream 1794732 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 2212312 3018776 ~ 3043773 (+)

Expression


Co-expression Network