G157438


Basic Information

Item Value
gene id G157438
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 932683 ~ 933112 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178765
GCCGGAAGGATTATAGCTTATATTTGCTCTGTAAAAAAGTCTAAACATCCTGAATAAGTTTAAATACATAGACATACATAAGGACATTAGGAATTTAAAGGTGTAGCAAACATGCACATTTTGATGAAAAAAAATGTATGGAGTCGAAAGCTGGTGTCTGGGCTATGTATGTAGGCTATATATTCATTTATTTACTGCATTTAGTATTTCTTTCTTTTTTTTTCTTTTTTTCTTTTTTTTTTTCCTTAGGCGACATGTAGCCTACATTTCAATTTACTTAAAAGTCTTACTCAAAAGTCTTAAAAGTTGTCCCCGGTTATCCATCAACCCATCAGGCCTACTAAATAATTGGCTAATAATACTAATTCTTTCCTTTTATCTTAAAGAGCGCTCTTTAATGTCAACCCTGTTACCATGATTTCTGTATACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178765 True 430 lncRNA 0.32 1 932683 933112

Neighbor

gene id symbol gene type direction distance location
CI01000030_00873074_00886771 GPC1A coding upstream 45876 871944 ~ 886807 (+)
CI01000030_00857611_00858359 NA coding upstream 73825 857470 ~ 858858 (+)
CI01000030_00811105_00836626 GPC5B coding upstream 95935 811105 ~ 836748 (+)
CI01000030_00760361_00762546 NA coding upstream 169866 760361 ~ 762817 (+)
CI01000030_00753779_00759287 NA coding upstream 173363 753731 ~ 759320 (+)
CI01000030_00937645_00942188 LPL coding downstream 4533 937645 ~ 942822 (+)
CI01000030_00945680_00950479 NA coding downstream 12568 945680 ~ 950916 (+)
CI01000030_01003310_01003776 NA coding downstream 70002 1003114 ~ 1003795 (+)
CI01000030_01091944_01093682 KLF2A coding downstream 158587 1091699 ~ 1094481 (+)
CI01000030_01134054_01144773 STIL coding downstream 200942 1134054 ~ 1145322 (+)
G157338 NA non-coding upstream 7681 909005 ~ 925002 (+)
G157336 NA non-coding upstream 11128 918129 ~ 921555 (+)
G157431 NA non-coding upstream 35267 896867 ~ 897416 (+)
G157349 NA non-coding upstream 43648 887808 ~ 889035 (+)
G157403 NA non-coding upstream 131539 800910 ~ 801144 (+)
G157443 NA non-coding downstream 3449 936561 ~ 936855 (+)
G157452 NA non-coding downstream 47277 980389 ~ 980764 (+)
G157337 NA non-coding downstream 48389 981501 ~ 984600 (+)
G157454 NA non-coding downstream 79320 1012432 ~ 1012687 (+)
G157456 NA non-coding downstream 81461 1014573 ~ 1014902 (+)
G157227 NA other upstream 576200 327649 ~ 356483 (+)
G157108 NA other upstream 785830 116156 ~ 146853 (+)
G157076 NA other upstream 914927 12878 ~ 17756 (+)
G157726 NA other downstream 703755 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1346001 2277208 ~ 2282743 (+)
G158416 NA other downstream 1662764 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 2080344 3018776 ~ 3043773 (+)

Expression


Co-expression Network