G157443


Basic Information

Item Value
gene id G157443
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 936561 ~ 936855 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178770
AAACAATGACACAGCCGTGTTTTAGTTTAGGAGGAGGCATTCTGTGTGAATATAGTGTACAATGTTTCGATTTAAAGTAACATTTTAATTTGGTGCAAAGCGCTGATCAAACAATTATTTAGACTGTGGGTGATTTTATCAGCTGGTTGTGATAACCTTGGGTAGACTGTAATGATCAAAAAGGAATTATTTACAGGGTTGCCAGGTTTTCACAACAAAATCCGCCCAGTTGCTATTCAAAACTACCCCAAAACTAGACCAATCACGTTTCATGGGGGGTCCCACAGTAAAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178770 True 295 lncRNA 0.38 1 936561 936855

Neighbor

gene id symbol gene type direction distance location
CI01000030_00873074_00886771 GPC1A coding upstream 49754 871944 ~ 886807 (+)
CI01000030_00857611_00858359 NA coding upstream 77703 857470 ~ 858858 (+)
CI01000030_00811105_00836626 GPC5B coding upstream 99813 811105 ~ 836748 (+)
CI01000030_00760361_00762546 NA coding upstream 173744 760361 ~ 762817 (+)
CI01000030_00753779_00759287 NA coding upstream 177241 753731 ~ 759320 (+)
CI01000030_00937645_00942188 LPL coding downstream 790 937645 ~ 942822 (+)
CI01000030_00945680_00950479 NA coding downstream 8825 945680 ~ 950916 (+)
CI01000030_01003310_01003776 NA coding downstream 66259 1003114 ~ 1003795 (+)
CI01000030_01091944_01093682 KLF2A coding downstream 154844 1091699 ~ 1094481 (+)
CI01000030_01134054_01144773 STIL coding downstream 197199 1134054 ~ 1145322 (+)
G157438 NA non-coding upstream 3449 932683 ~ 933112 (+)
G157338 NA non-coding upstream 11559 909005 ~ 925002 (+)
G157336 NA non-coding upstream 15006 918129 ~ 921555 (+)
G157431 NA non-coding upstream 39145 896867 ~ 897416 (+)
G157349 NA non-coding upstream 47526 887808 ~ 889035 (+)
G157452 NA non-coding downstream 43534 980389 ~ 980764 (+)
G157337 NA non-coding downstream 44646 981501 ~ 984600 (+)
G157454 NA non-coding downstream 75577 1012432 ~ 1012687 (+)
G157456 NA non-coding downstream 77718 1014573 ~ 1014902 (+)
G157471 NA non-coding downstream 92397 1029252 ~ 1029810 (+)
G157227 NA other upstream 580078 327649 ~ 356483 (+)
G157108 NA other upstream 789708 116156 ~ 146853 (+)
G157076 NA other upstream 918805 12878 ~ 17756 (+)
G157726 NA other downstream 700012 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1342258 2277208 ~ 2282743 (+)
G158416 NA other downstream 1659021 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 2076601 3018776 ~ 3043773 (+)

Expression


Co-expression Network