G157452


Basic Information

Item Value
gene id G157452
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 980389 ~ 980764 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178783
TTAGGACATTGTGGAACTGAAACACCATACACCAACTTCACCTCCCAGGACGTCGTCTGTTACAAGTCACTGGAGTCAAACCAAAGGTTCCCCTCAGTTCCTTTGAACTTTATTTGTTGCAAATTACTCTAAAACTGTTAATCATATGGAATGACCATCACAATCATGAATTCCCACCCCCAACTAAAATTTGCACTGCAGTGGTTTGTATCGAAGAGTGAAAAACGACACCCCACATTACCATGGTTAATTTCAAGCTAGCAATGCACAATATCCCCCGTAGAGTTTGTTGTCATGATGATTAACTGAAAACAGATTCAGAAGTGAATGCAGAGCCTCAATTTTGGGACAAGGCCACCCCTGACTTATAAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178783 True 376 lncRNA 0.41 1 980389 980764

Neighbor

gene id symbol gene type direction distance location
CI01000030_00945680_00950479 NA coding upstream 29473 945680 ~ 950916 (+)
CI01000030_00937645_00942188 LPL coding upstream 37567 937645 ~ 942822 (+)
CI01000030_00873074_00886771 GPC1A coding upstream 93582 871944 ~ 886807 (+)
CI01000030_00857611_00858359 NA coding upstream 121531 857470 ~ 858858 (+)
CI01000030_00811105_00836626 GPC5B coding upstream 143641 811105 ~ 836748 (+)
CI01000030_01003310_01003776 NA coding downstream 22350 1003114 ~ 1003795 (+)
CI01000030_01091944_01093682 KLF2A coding downstream 110935 1091699 ~ 1094481 (+)
CI01000030_01134054_01144773 STIL coding downstream 153290 1134054 ~ 1145322 (+)
CI01000030_01151171_01165675 RC3H1A coding downstream 170166 1150930 ~ 1165939 (+)
CI01000030_01172285_01175092 SERPINC1 coding downstream 191431 1172195 ~ 1175095 (+)
G157443 NA non-coding upstream 43534 936561 ~ 936855 (+)
G157438 NA non-coding upstream 47277 932683 ~ 933112 (+)
G157338 NA non-coding upstream 55387 909005 ~ 925002 (+)
G157336 NA non-coding upstream 58834 918129 ~ 921555 (+)
G157431 NA non-coding upstream 82973 896867 ~ 897416 (+)
G157337 NA non-coding downstream 737 981501 ~ 984600 (+)
G157454 NA non-coding downstream 31668 1012432 ~ 1012687 (+)
G157456 NA non-coding downstream 33809 1014573 ~ 1014902 (+)
G157471 NA non-coding downstream 48488 1029252 ~ 1029810 (+)
G157484 NA non-coding downstream 69572 1050336 ~ 1050690 (+)
G157227 NA other upstream 623906 327649 ~ 356483 (+)
G157108 NA other upstream 833536 116156 ~ 146853 (+)
G157076 NA other upstream 962633 12878 ~ 17756 (+)
G157726 NA other downstream 656103 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1298349 2277208 ~ 2282743 (+)
G158416 NA other downstream 1615112 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 2032692 3018776 ~ 3043773 (+)

Expression


Co-expression Network