G157484


Basic Information

Item Value
gene id G157484
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1050336 ~ 1050690 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178817
ACGATTGGTCATTTTCTAAAAAAAATACAAATTTATACACTTTTAACCACAAATGCTTGTCTTGCACTGCTCTGAAATACACCATGCATTACGTTGAAAGGTCACGCATGACATAGGCGGAAGTAGGGTGAAAACCTTCATCTAATTTTCTCCTTCAACTTCAAAATCATCCGATATCGTTGTTTTACCTATTTTTTTGTAAAGGCCCTTTGGCTTAGTCTTTGCACGTTCGCTTTGTAGACACTGGATCGGTACTTCCACCTACATCATGCATGACCTTTGTAACGTGATTACGTCATGTGTGCGGATCGCAGAGCAGTGGTTAAAAAGTATATAATTTTTTTTTTTTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178817 True 355 lncRNA 0.37 1 1050336 1050690

Neighbor

gene id symbol gene type direction distance location
CI01000030_01003310_01003776 NA coding upstream 46541 1003114 ~ 1003795 (+)
CI01000030_00945680_00950479 NA coding upstream 99420 945680 ~ 950916 (+)
CI01000030_00937645_00942188 LPL coding upstream 107514 937645 ~ 942822 (+)
CI01000030_00873074_00886771 GPC1A coding upstream 163529 871944 ~ 886807 (+)
CI01000030_00857611_00858359 NA coding upstream 191478 857470 ~ 858858 (+)
CI01000030_01091944_01093682 KLF2A coding downstream 41009 1091699 ~ 1094481 (+)
CI01000030_01134054_01144773 STIL coding downstream 83364 1134054 ~ 1145322 (+)
CI01000030_01151171_01165675 RC3H1A coding downstream 100240 1150930 ~ 1165939 (+)
CI01000030_01172285_01175092 SERPINC1 coding downstream 121505 1172195 ~ 1175095 (+)
CI01000030_01218528_01228673 DPH5 coding downstream 166841 1217531 ~ 1228693 (+)
G157471 NA non-coding upstream 20526 1029252 ~ 1029810 (+)
G157456 NA non-coding upstream 35434 1014573 ~ 1014902 (+)
G157454 NA non-coding upstream 37649 1012432 ~ 1012687 (+)
G157337 NA non-coding upstream 65736 981501 ~ 984600 (+)
G157452 NA non-coding upstream 69572 980389 ~ 980764 (+)
G157501 NA non-coding downstream 16472 1067162 ~ 1067470 (+)
G157511 NA non-coding downstream 27757 1078447 ~ 1078676 (+)
G157535 NA non-coding downstream 45660 1096350 ~ 1096570 (+)
G157536 NA non-coding downstream 46043 1096733 ~ 1097008 (+)
G157525 NA non-coding downstream 47227 1097917 ~ 1099182 (+)
G157227 NA other upstream 693853 327649 ~ 356483 (+)
G157108 NA other upstream 903483 116156 ~ 146853 (+)
G157076 NA other upstream 1032580 12878 ~ 17756 (+)
G157726 NA other downstream 586177 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1228423 2277208 ~ 2282743 (+)
G158416 NA other downstream 1545186 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1962766 3018776 ~ 3043773 (+)
G159685 NA other downstream 3381110 4431800 ~ 4488526 (+)

Expression


Co-expression Network