G157551


Basic Information

Item Value
gene id G157551
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1131119 ~ 1133120 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178889
GGCAAGACTTTCAAAAATACCATCAAATTTGCTCTTCTCTTCAGGCCGCACTGCCCAGTGGCTCTCACTGGTTGACGTCACAGAACTCAGTGACGGGCTGCTGTGGTCCTTAAATTTTGGAGGTGGAACGGGGAGGTTTATACTGGAAAGGCTGATGTCATGCCCACTCTGCGCGCAGGCCACAAGTCGCAGAGCAACGTAAAATCCCTGTTTATCCAAGAAACCTTTGCCATCTGGATCAGCTAAATCCCAGATCTTTCCTAATGTGATGTCTGGCAGGCCTGATTTCTTCAAGAACAAGGCAGCCTCTGTAGGTCCAACCCTCCCGGTGTTTCCTGGGTCGACCTGTCTGTAAAAGTTCTCATATACAGGGTTCCCGCTTGACAGCTGAGTGAGGGTCGCGAGGGCTGCCATCTTTTCCCTGTTGCTGCGGAAACAGCGGGTGAGGGAATGAGGGGGGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178889 True 463 lncRNA 0.52 7 1131119 1133120

Neighbor

gene id symbol gene type direction distance location
CI01000030_01091944_01093682 KLF2A coding upstream 36638 1091699 ~ 1094481 (+)
CI01000030_01003310_01003776 NA coding upstream 127324 1003114 ~ 1003795 (+)
CI01000030_00945680_00950479 NA coding upstream 180203 945680 ~ 950916 (+)
CI01000030_00937645_00942188 LPL coding upstream 188297 937645 ~ 942822 (+)
CI01000030_00873074_00886771 GPC1A coding upstream 244312 871944 ~ 886807 (+)
CI01000030_01134054_01144773 STIL coding downstream 934 1134054 ~ 1145322 (+)
CI01000030_01151171_01165675 RC3H1A coding downstream 17810 1150930 ~ 1165939 (+)
CI01000030_01172285_01175092 SERPINC1 coding downstream 39075 1172195 ~ 1175095 (+)
CI01000030_01218528_01228673 DPH5 coding downstream 84411 1217531 ~ 1228693 (+)
CI01000030_01340285_01347038 DBT coding downstream 207165 1340285 ~ 1347860 (+)
G157525 NA non-coding upstream 31937 1097917 ~ 1099182 (+)
G157536 NA non-coding upstream 34111 1096733 ~ 1097008 (+)
G157535 NA non-coding upstream 34549 1096350 ~ 1096570 (+)
G157511 NA non-coding upstream 52443 1078447 ~ 1078676 (+)
G157501 NA non-coding upstream 63649 1067162 ~ 1067470 (+)
G157529 NA non-coding downstream 46884 1180004 ~ 1181934 (+)
G157526 NA non-coding downstream 49973 1183093 ~ 1183563 (+)
G157552 NA non-coding downstream 51180 1184300 ~ 1184509 (+)
G157555 NA non-coding downstream 61014 1194134 ~ 1194445 (+)
G157556 NA non-coding downstream 61353 1194473 ~ 1194695 (+)
G157227 NA other upstream 774636 327649 ~ 356483 (+)
G157108 NA other upstream 984266 116156 ~ 146853 (+)
G157076 NA other upstream 1113363 12878 ~ 17756 (+)
G157726 NA other downstream 503747 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1145993 2277208 ~ 2282743 (+)
G158416 NA other downstream 1462756 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1880336 3018776 ~ 3043773 (+)
G159685 NA other downstream 3298680 4431800 ~ 4488526 (+)

Expression


Co-expression Network