G157556


Basic Information

Item Value
gene id G157556
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1194473 ~ 1194695 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178895
ACAAAATAAAATTAAAAAACAAAATAAAATAAACAAAATATACACAAAATAATAAATAAATAAATACGATAAATGACAATAAATAGATAAGAAAAACCGCAATAAAGAAAGAAACAAAAAAAACAAACAAATAGATAATAAAATAAGTTAAAAAAACTAAAAACTAAATAAAATATAAAACAAAAATAAATAAAAAATAAATAAACAACAATAAATACACAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178895 True 223 lncRNA 0.13 1 1194473 1194695

Neighbor

gene id symbol gene type direction distance location
CI01000030_01172285_01175092 SERPINC1 coding upstream 19378 1172195 ~ 1175095 (+)
CI01000030_01151171_01165675 RC3H1A coding upstream 28534 1150930 ~ 1165939 (+)
CI01000030_01134054_01144773 STIL coding upstream 49151 1134054 ~ 1145322 (+)
CI01000030_01091944_01093682 KLF2A coding upstream 99992 1091699 ~ 1094481 (+)
CI01000030_01003310_01003776 NA coding upstream 190678 1003114 ~ 1003795 (+)
CI01000030_01218528_01228673 DPH5 coding downstream 22836 1217531 ~ 1228693 (+)
CI01000030_01340285_01347038 DBT coding downstream 145590 1340285 ~ 1347860 (+)
CI01000030_01348899_01349420 NA coding downstream 154204 1348899 ~ 1350043 (+)
CI01000030_01350908_01353719 LRRC39 coding downstream 156213 1350908 ~ 1353747 (+)
CI01000030_01360575_01378361 OSBPL1A coding downstream 165880 1360575 ~ 1379067 (+)
G157555 NA non-coding upstream 28 1194134 ~ 1194445 (+)
G157552 NA non-coding upstream 9964 1184300 ~ 1184509 (+)
G157526 NA non-coding upstream 10910 1183093 ~ 1183563 (+)
G157529 NA non-coding upstream 12539 1180004 ~ 1181934 (+)
G157551 NA non-coding upstream 61353 1131119 ~ 1133120 (+)
G157559 NA non-coding downstream 1155 1195850 ~ 1196197 (+)
G157567 NA non-coding downstream 16808 1211503 ~ 1211721 (+)
G157581 NA non-coding downstream 54832 1249527 ~ 1249789 (+)
G157528 NA non-coding downstream 72899 1267594 ~ 1270259 (+)
G157572 NA non-coding downstream 82600 1277295 ~ 1278062 (+)
G157227 NA other upstream 837990 327649 ~ 356483 (+)
G157108 NA other upstream 1047620 116156 ~ 146853 (+)
G157076 NA other upstream 1176717 12878 ~ 17756 (+)
G157726 NA other downstream 442172 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1084418 2277208 ~ 2282743 (+)
G158416 NA other downstream 1401181 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1818761 3018776 ~ 3043773 (+)
G159685 NA other downstream 3237105 4431800 ~ 4488526 (+)

Expression


Co-expression Network