G157567


Basic Information

Item Value
gene id G157567
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1211503 ~ 1211721 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU178906
TCCAAAGATAGAAAACAGATGCTTTGAACTATCTTTACACAATACATTAAACAAGAGATAAGAGACCAGGGCGTAATGAGGAGGACAGGGAAAAAAGAAAGATGGCAGGAAAATAGAGAGTGGGACAGAGGAGAGACGAGAGAGGCCCTGCAACTCTTTGTTAGCCGCACAGAACGATCTCCAATTACCGCACAAAAGAAGCTCATTCAGGAGGCACGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178906 True 219 lncRNA 0.45 1 1211503 1211721

Neighbor

gene id symbol gene type direction distance location
CI01000030_01172285_01175092 SERPINC1 coding upstream 36408 1172195 ~ 1175095 (+)
CI01000030_01151171_01165675 RC3H1A coding upstream 45564 1150930 ~ 1165939 (+)
CI01000030_01134054_01144773 STIL coding upstream 66181 1134054 ~ 1145322 (+)
CI01000030_01091944_01093682 KLF2A coding upstream 117022 1091699 ~ 1094481 (+)
CI01000030_01003310_01003776 NA coding upstream 207708 1003114 ~ 1003795 (+)
CI01000030_01218528_01228673 DPH5 coding downstream 5810 1217531 ~ 1228693 (+)
CI01000030_01340285_01347038 DBT coding downstream 128564 1340285 ~ 1347860 (+)
CI01000030_01348899_01349420 NA coding downstream 137178 1348899 ~ 1350043 (+)
CI01000030_01350908_01353719 LRRC39 coding downstream 139187 1350908 ~ 1353747 (+)
CI01000030_01360575_01378361 OSBPL1A coding downstream 148854 1360575 ~ 1379067 (+)
G157559 NA non-coding upstream 15306 1195850 ~ 1196197 (+)
G157556 NA non-coding upstream 16808 1194473 ~ 1194695 (+)
G157555 NA non-coding upstream 17058 1194134 ~ 1194445 (+)
G157552 NA non-coding upstream 26994 1184300 ~ 1184509 (+)
G157526 NA non-coding upstream 27940 1183093 ~ 1183563 (+)
G157581 NA non-coding downstream 37806 1249527 ~ 1249789 (+)
G157528 NA non-coding downstream 55873 1267594 ~ 1270259 (+)
G157572 NA non-coding downstream 65574 1277295 ~ 1278062 (+)
G157631 NA non-coding downstream 255501 1467222 ~ 1467855 (+)
G157649 NA non-coding downstream 282181 1493902 ~ 1518773 (+)
G157227 NA other upstream 855020 327649 ~ 356483 (+)
G157108 NA other upstream 1064650 116156 ~ 146853 (+)
G157076 NA other upstream 1193747 12878 ~ 17756 (+)
G157726 NA other downstream 425146 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 1067392 2277208 ~ 2282743 (+)
G158416 NA other downstream 1384155 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1801735 3018776 ~ 3043773 (+)
G159685 NA other downstream 3220079 4431800 ~ 4488526 (+)

Expression


Co-expression Network