Gene
RNA
| Item | Value |
|---|---|
| gene id | G157572 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000030 |
| NCBI id | null |
| chromosome length | 11638347 |
| location | 1277295 ~ 1278062 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU178911 | True | 768 | lncRNA | 0.33 | 1 | 1277295 | 1278062 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000030_01218528_01228673 | DPH5 | coding | upstream | 48602 | 1217531 ~ 1228693 (+) |
| CI01000030_01172285_01175092 | SERPINC1 | coding | upstream | 102200 | 1172195 ~ 1175095 (+) |
| CI01000030_01151171_01165675 | RC3H1A | coding | upstream | 111356 | 1150930 ~ 1165939 (+) |
| CI01000030_01134054_01144773 | STIL | coding | upstream | 131973 | 1134054 ~ 1145322 (+) |
| CI01000030_01091944_01093682 | KLF2A | coding | upstream | 182814 | 1091699 ~ 1094481 (+) |
| CI01000030_01340285_01347038 | DBT | coding | downstream | 62223 | 1340285 ~ 1347860 (+) |
| CI01000030_01348899_01349420 | NA | coding | downstream | 70837 | 1348899 ~ 1350043 (+) |
| CI01000030_01350908_01353719 | LRRC39 | coding | downstream | 72846 | 1350908 ~ 1353747 (+) |
| CI01000030_01360575_01378361 | OSBPL1A | coding | downstream | 82513 | 1360575 ~ 1379067 (+) |
| CI01000030_01384095_01386916 | NA | coding | downstream | 106033 | 1384095 ~ 1386936 (+) |
| G157528 | NA | non-coding | upstream | 7036 | 1267594 ~ 1270259 (+) |
| G157581 | NA | non-coding | upstream | 27506 | 1249527 ~ 1249789 (+) |
| G157567 | NA | non-coding | upstream | 65574 | 1211503 ~ 1211721 (+) |
| G157559 | NA | non-coding | upstream | 81098 | 1195850 ~ 1196197 (+) |
| G157556 | NA | non-coding | upstream | 82600 | 1194473 ~ 1194695 (+) |
| G157631 | NA | non-coding | downstream | 189160 | 1467222 ~ 1467855 (+) |
| G157649 | NA | non-coding | downstream | 215840 | 1493902 ~ 1518773 (+) |
| CI01000030_01683292_01689297 | NA | non-coding | downstream | 324468 | 1682016 ~ 1689371 (+) |
| G157853 | NA | non-coding | downstream | 543226 | 1821288 ~ 1821735 (+) |
| G157856 | NA | non-coding | downstream | 545642 | 1823704 ~ 1823918 (+) |
| CI01000030_01003310_01003776 | NA | other | upstream | 270608 | 1003114 ~ 1003795 (+) |
| G157227 | NA | other | upstream | 920812 | 327649 ~ 356483 (+) |
| G157108 | NA | other | upstream | 1130442 | 116156 ~ 146853 (+) |
| G157076 | NA | other | upstream | 1259539 | 12878 ~ 17756 (+) |
| G157726 | NA | other | downstream | 358805 | 1636867 ~ 1638227 (+) |
| CI01000030_02277208_02282376 | TM6SF2 | other | downstream | 1001051 | 2277208 ~ 2282743 (+) |
| G158416 | NA | other | downstream | 1317814 | 2595876 ~ 2614293 (+) |
| CI01000030_03018776_03042194 | FGF22 | other | downstream | 1735394 | 3018776 ~ 3043773 (+) |
| G159685 | NA | other | downstream | 3153738 | 4431800 ~ 4488526 (+) |
