G157726


Basic Information

Item Value
gene id G157726
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1636867 ~ 1638227 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU179078
TATAATATTATATATATTATCACTGTAGTATGTAATATACATTTTATAAATAATATATTAAAATTATATAATGTAATGTAAAAAAATTATAATTTATAATGGCACCTCATGGCAAAGAACTCTCTGAGGATTTGAGAATTAGAATTGTTGCTCTCCACAAAGTTGGCCTAGGCTTTAAGAAGTTCAGTAACACTCTGAAGTTACAGTACAGTGGCCAGGGTCATAGAGAGAGGTTTTCCAAGACGGGTTCCACTCGGAACAGGCCTCGCAAGGGTTGATCAAAGTAGTTGAGTCCTCGTGCTGTGCATCAGGTGCAGAAGCTGGCTTCAAAAAACATATGCATGAGTGCTGCCAGCATTACTTTAGAGGTTGCAGAAGCGGAAGGTCAGCTTGTCAGTGCTCAGACCATAAGCCGCACACTGCAACATGTCGGTTTGCATGGCCGTCGTCCCAGAAGGAAGCCTCTTCTGAAGCTGGCTCACAAGAAAGCCTGCAAACAGTTTGCTGAAGACAACCTGTCCAAGAGCATGAATTACTGGAACCATGTCCTGTGGTCTGATGAGACTAAGATAAACTTGTTTGGCTCAGATGGTGTCCAGCATGTGTGGCGACGCCCTGGTGAGGAGTAGCAAGAAAATTGTGTCTTGCCTACAGTCAAGCATGGTGGTGGTAGCATCATAGTCTGAGGCTGCATGAGTGCTGCTGGGACTGGGGAACTGCACTTCATTGAGGGAAACATGGATTCCAACATGTACTGTGACATTCTGAAGCAAAACATGATGCCCTCCGTTCAGAAACTAGGCCGAATGGCATGATAATGACCCCAAACACACCGCCAAGATGACAACTGCCTTGCTGAGGAAGCTGAAGGTGAAGGTGATGGAGTGGGGAAGTATGTCTCCAGACCTGAACCCTATTGAGCACCTGTGGGGCATCCTCAAGCGGAAGGTGGAGAAGCACCATGTGTCACATCCAGCAGCTCTGTGATGTCATTATGGAGAAGTGGAAGAGGATCCCAGCAACAACCTTTGCAGCTTTGGTGAATTCCATGCCCAGGAGGATTAAGGCAGTGCTAGATAACAGTGGTGTTCACACAAAGTATTGACACTTTGGTCACAGTTTTGACATGTTCACGTAGGGTGTACTCACTTTTGTTGCCAGTTAATTAGACAATAATGGCTGTATTTGGAGTTATTTTTAGAGGACAGTAAATCTGTACTACTATACAAGCAGCACATTGACTACTCTAAAGTGTATACAATTTTCATTTCTATAGTATTGTCGCTTGAGAAGATATACTAAAATGGTTGCTGAAATGTGA

Function

NR:

description
PREDICTED: coiled-coil domain-containing protein 102A-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179078 True 1321 TUCP 0.44 2 1636867 1638227

Neighbor

gene id symbol gene type direction distance location
CI01000030_01514203_01515696 PDZK1IP1 coding upstream 120392 1511645 ~ 1516475 (+)
CI01000030_01504763_01508773 TAL1 coding upstream 127863 1504698 ~ 1509004 (+)
CI01000030_01480370_01481206 IER5 coding upstream 155165 1480038 ~ 1481702 (+)
CI01000030_01453143_01466193 NA coding upstream 170589 1453143 ~ 1466278 (+)
CI01000030_01433149_01437563 VPS4B.S, VPS4B, MGC82073 coding upstream 198937 1433149 ~ 1437930 (+)
CI01000030_01683292_01689297 NA coding downstream 43789 1682016 ~ 1689371 (+)
CI01000030_01733476_01734513 NA coding downstream 94577 1732804 ~ 1734663 (+)
CI01000030_01735473_01743982 NA coding downstream 96537 1734764 ~ 1744746 (+)
CI01000030_01749399_01752421 NA coding downstream 110677 1748904 ~ 1752518 (+)
CI01000030_01818694_01832525 NA coding downstream 177535 1815762 ~ 1832948 (+)
G157649 NA non-coding upstream 118094 1493902 ~ 1518773 (+)
G157631 NA non-coding upstream 169012 1467222 ~ 1467855 (+)
G157572 NA non-coding upstream 358805 1277295 ~ 1278062 (+)
G157528 NA non-coding upstream 366608 1267594 ~ 1270259 (+)
G157581 NA non-coding upstream 387078 1249527 ~ 1249789 (+)
G157853 NA non-coding downstream 183061 1821288 ~ 1821735 (+)
G157856 NA non-coding downstream 185477 1823704 ~ 1823918 (+)
G157857 NA non-coding downstream 188514 1826741 ~ 1827034 (+)
G157855 NA non-coding downstream 271977 1910204 ~ 1910604 (+)
CI01000030_01972795_01974531 NA non-coding downstream 336719 1972795 ~ 1975434 (+)
CI01000030_01003310_01003776 NA other upstream 630180 1003114 ~ 1003795 (+)
G157227 NA other upstream 1280384 327649 ~ 356483 (+)
G157108 NA other upstream 1490014 116156 ~ 146853 (+)
G157076 NA other upstream 1619111 12878 ~ 17756 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 640886 2277208 ~ 2282743 (+)
G158416 NA other downstream 957649 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1375229 3018776 ~ 3043773 (+)
G159685 NA other downstream 2793573 4431800 ~ 4488526 (+)
G159816 NA other downstream 2878551 4516778 ~ 4517381 (+)

Expression


Co-expression Network