G157857


Basic Information

Item Value
gene id G157857
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1826741 ~ 1827034 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU179218
AAAACTGTATATTTCTGGCATATGGACATTACTTTGACACAGTCACTTCTGATAACAGATTACTCTAAACTTAAACATGCATTTTCTGTAAAGCTGCTTTGAAATGATATGTATTGTAAAAAGCTCACTACAAATATTTGTGAATTGAACTAAATATGGCTAGAGCAACCTGACTTGTTTTAAAAGGGACTTTGATTACCACCAATGATCTACTAATATTGTAAATTAAAATGAGGAGGACATTAAAATAAGTCCTAGTCCCAGCTGGCACTGAATCTGTCCCCGGCAAGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179218 True 294 lncRNA 0.34 1 1826741 1827034

Neighbor

gene id symbol gene type direction distance location
CI01000030_01749399_01752421 NA coding upstream 74223 1748904 ~ 1752518 (+)
CI01000030_01735473_01743982 NA coding upstream 81995 1734764 ~ 1744746 (+)
CI01000030_01733476_01734513 NA coding upstream 92078 1732804 ~ 1734663 (+)
CI01000030_01683292_01689297 NA coding upstream 137370 1682016 ~ 1689371 (+)
CI01000030_01636207_01648294 TM2D1 coding upstream 178138 1636207 ~ 1648603 (+)
CI01000030_01835873_01839144 NA coding downstream 8486 1835520 ~ 1839180 (+)
CI01000030_01875455_01901837 NA coding downstream 48421 1875455 ~ 1902005 (+)
CI01000030_01902669_01906805 NA coding downstream 75635 1902669 ~ 1907231 (+)
CI01000030_01912241_01917759 RAB3C, RAB3B coding downstream 85207 1912241 ~ 1918777 (+)
CI01000030_01920523_01930701 NA coding downstream 93489 1920523 ~ 1931000 (+)
G157856 NA non-coding upstream 2823 1823704 ~ 1823918 (+)
G157853 NA non-coding upstream 5006 1821288 ~ 1821735 (+)
G157649 NA non-coding upstream 307968 1493902 ~ 1518773 (+)
G157631 NA non-coding upstream 358886 1467222 ~ 1467855 (+)
G157855 NA non-coding downstream 83170 1910204 ~ 1910604 (+)
CI01000030_01972795_01974531 NA non-coding downstream 147912 1972795 ~ 1975434 (+)
G158441 NA non-coding downstream 249492 2076526 ~ 2083232 (+)
G158412 NA non-coding downstream 259004 2086038 ~ 2090083 (+)
G158439 NA non-coding downstream 269460 2096494 ~ 2174147 (+)
G157726 NA other upstream 188514 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 820054 1003114 ~ 1003795 (+)
G157227 NA other upstream 1470258 327649 ~ 356483 (+)
G157108 NA other upstream 1679888 116156 ~ 146853 (+)
G157076 NA other upstream 1808985 12878 ~ 17756 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 452079 2277208 ~ 2282743 (+)
G158416 NA other downstream 768842 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1186422 3018776 ~ 3043773 (+)
G159685 NA other downstream 2604766 4431800 ~ 4488526 (+)
G159816 NA other downstream 2689744 4516778 ~ 4517381 (+)

Expression


Co-expression Network