G157855


Basic Information

Item Value
gene id G157855
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1910204 ~ 1910604 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU179216
GAGTGAAAAAAGTGCAGACAAGACGGACAGTTCTCTGTTCTCGTAGGCCTACTGATCATTTATCAATAATGTTATTTATTTATTGATAGATAGATTATAGATTACACTTTGTATATTACACTGACTTTAACGAAAACTACTGTTTTACAGAACGTGCAATGCCTACTGTGTTCACGCCTTTTACACGGTTTTGACCAGCGGATGTCACTAGCGTGCCACGCATGCTTTGAAGTAATACGAGAAAGTTTCTAATTATTATGAGAAACTAAGTCATTATTATGAGAAAAGGTCATAATTACGAGAAAGTTTCTCATTATTATGATTTACAGAATCATATTTTTTACTCAAGTGTGGCAGTTAACTGCGCACAAGAAAGTCTCCTCAAAACTCCGCCCACACGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179216 True 401 lncRNA 0.36 1 1910204 1910604

Neighbor

gene id symbol gene type direction distance location
CI01000030_01902669_01906805 NA coding upstream 2973 1902669 ~ 1907231 (+)
CI01000030_01875455_01901837 NA coding upstream 8199 1875455 ~ 1902005 (+)
CI01000030_01835873_01839144 NA coding upstream 71024 1835520 ~ 1839180 (+)
CI01000030_01818694_01832525 NA coding upstream 77256 1815762 ~ 1832948 (+)
CI01000030_01749399_01752421 NA coding upstream 157686 1748904 ~ 1752518 (+)
CI01000030_01912241_01917759 RAB3C, RAB3B coding downstream 1637 1912241 ~ 1918777 (+)
CI01000030_01920523_01930701 NA coding downstream 9919 1920523 ~ 1931000 (+)
CI01000030_01932035_01939204 AXDND1 coding downstream 21431 1932035 ~ 1939920 (+)
CI01000030_01945306_01955404 NA coding downstream 34702 1945306 ~ 1955404 (+)
CI01000030_01972795_01974531 NA coding downstream 62191 1972795 ~ 1975434 (+)
G157857 NA non-coding upstream 83170 1826741 ~ 1827034 (+)
G157856 NA non-coding upstream 86286 1823704 ~ 1823918 (+)
G157853 NA non-coding upstream 88469 1821288 ~ 1821735 (+)
CI01000030_01683292_01689297 NA non-coding upstream 225736 1682016 ~ 1689371 (+)
G157649 NA non-coding upstream 391431 1493902 ~ 1518773 (+)
G158441 NA non-coding downstream 165922 2076526 ~ 2083232 (+)
G158412 NA non-coding downstream 175434 2086038 ~ 2090083 (+)
G158439 NA non-coding downstream 185890 2096494 ~ 2174147 (+)
G158397 NA non-coding downstream 194798 2105402 ~ 2159275 (+)
G157726 NA other upstream 271977 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 903517 1003114 ~ 1003795 (+)
G157227 NA other upstream 1553721 327649 ~ 356483 (+)
G157108 NA other upstream 1763351 116156 ~ 146853 (+)
G157076 NA other upstream 1892448 12878 ~ 17756 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 368509 2277208 ~ 2282743 (+)
G158416 NA other downstream 685272 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1102852 3018776 ~ 3043773 (+)
G159685 NA other downstream 2521196 4431800 ~ 4488526 (+)
G159816 NA other downstream 2606174 4516778 ~ 4517381 (+)

Expression


Co-expression Network