Gene
RNA
| Item | Value |
|---|---|
| gene id | G158439 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000030 |
| NCBI id | null |
| chromosome length | 11638347 |
| location | 2096494 ~ 2174147 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU179909 | True | 579 | lncRNA | 0.44 | 3 | 2096494 | 2174147 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000030_02058151_02072387 | RABGAP1L | coding | upstream | 23984 | 2057847 ~ 2072510 (+) |
| CI01000030_02039525_02050052 | RABGAP1L | coding | upstream | 46264 | 2038298 ~ 2050230 (+) |
| CI01000030_02025674_02036478 | NA | coding | upstream | 58547 | 2023299 ~ 2037947 (+) |
| CI01000030_01985397_02017638 | GPR52 | coding | upstream | 78300 | 1985397 ~ 2018194 (+) |
| CI01000030_01972795_01974531 | NA | coding | upstream | 121060 | 1972795 ~ 1975434 (+) |
| CI01000030_02256592_02257308 | NA | coding | downstream | 82383 | 2256530 ~ 2257589 (+) |
| CI01000030_02260437_02262817 | NA | coding | downstream | 86233 | 2260380 ~ 2262817 (+) |
| CI01000030_02277208_02282376 | TM6SF2 | coding | downstream | 103061 | 2277208 ~ 2282743 (+) |
| CI01000030_02289500_02291562 | HAPLN4, HPLN4 | coding | downstream | 115353 | 2289500 ~ 2292428 (+) |
| CI01000030_02423347_02426071 | NA | coding | downstream | 248621 | 2422768 ~ 2426301 (+) |
| G158412 | NA | non-coding | upstream | 6411 | 2086038 ~ 2090083 (+) |
| G158441 | NA | non-coding | upstream | 13262 | 2076526 ~ 2083232 (+) |
| G157855 | NA | non-coding | upstream | 185890 | 1910204 ~ 1910604 (+) |
| G157857 | NA | non-coding | upstream | 269460 | 1826741 ~ 1827034 (+) |
| G158487 | NA | non-coding | downstream | 84079 | 2258226 ~ 2258504 (+) |
| G158488 | NA | non-coding | downstream | 85082 | 2259229 ~ 2259454 (+) |
| G158490 | NA | non-coding | downstream | 87406 | 2261553 ~ 2261843 (+) |
| G158508 | NA | non-coding | downstream | 130350 | 2304497 ~ 2312470 (+) |
| G157726 | NA | other | upstream | 458267 | 1636867 ~ 1638227 (+) |
| CI01000030_01003310_01003776 | NA | other | upstream | 1089807 | 1003114 ~ 1003795 (+) |
| G157227 | NA | other | upstream | 1740011 | 327649 ~ 356483 (+) |
| G157108 | NA | other | upstream | 1949641 | 116156 ~ 146853 (+) |
| G157076 | NA | other | upstream | 2078738 | 12878 ~ 17756 (+) |
| G158416 | NA | other | downstream | 421729 | 2595876 ~ 2614293 (+) |
| CI01000030_03018776_03042194 | FGF22 | other | downstream | 839309 | 3018776 ~ 3043773 (+) |
| G159685 | NA | other | downstream | 2257653 | 4431800 ~ 4488526 (+) |
| G159816 | NA | other | downstream | 2342631 | 4516778 ~ 4517381 (+) |
