Gene
RNA
| Item | Value |
|---|---|
| gene id | G158508 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000030 |
| NCBI id | null |
| chromosome length | 11638347 |
| location | 2304497 ~ 2312470 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU179980 | True | 2477 | lncRNA | 0.42 | 3 | 2304497 | 2312470 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000030_02289500_02291562 | HAPLN4, HPLN4 | coding | upstream | 12069 | 2289500 ~ 2292428 (+) |
| CI01000030_02277208_02282376 | TM6SF2 | coding | upstream | 21754 | 2277208 ~ 2282743 (+) |
| CI01000030_02260437_02262817 | NA | coding | upstream | 41680 | 2260380 ~ 2262817 (+) |
| CI01000030_02256592_02257308 | NA | coding | upstream | 46908 | 2256530 ~ 2257589 (+) |
| CI01000030_02161055_02163914 | POLR2E | coding | upstream | 140583 | 2160763 ~ 2163914 (+) |
| CI01000030_02423347_02426071 | NA | coding | downstream | 110298 | 2422768 ~ 2426301 (+) |
| CI01000030_02452403_02456555 | NR2C2AP | coding | downstream | 139933 | 2452403 ~ 2456871 (+) |
| CI01000030_02466855_02469633 | NA | coding | downstream | 154115 | 2466585 ~ 2470573 (+) |
| CI01000030_02472528_02477483 | NA | coding | downstream | 160058 | 2472528 ~ 2477483 (+) |
| CI01000030_02531026_02532411 | NA | coding | downstream | 218039 | 2530509 ~ 2534232 (+) |
| G158490 | NA | non-coding | upstream | 42654 | 2261553 ~ 2261843 (+) |
| G158488 | NA | non-coding | upstream | 45043 | 2259229 ~ 2259454 (+) |
| G158487 | NA | non-coding | upstream | 45993 | 2258226 ~ 2258504 (+) |
| G158439 | NA | non-coding | upstream | 130350 | 2096494 ~ 2174147 (+) |
| G158397 | NA | non-coding | upstream | 145222 | 2105402 ~ 2159275 (+) |
| G158548 | NA | non-coding | downstream | 114024 | 2426494 ~ 2426775 (+) |
| G158555 | NA | non-coding | downstream | 134539 | 2447009 ~ 2447452 (+) |
| G158436 | NA | non-coding | downstream | 340174 | 2652644 ~ 2653106 (+) |
| G157726 | NA | other | upstream | 666270 | 1636867 ~ 1638227 (+) |
| CI01000030_01003310_01003776 | NA | other | upstream | 1297810 | 1003114 ~ 1003795 (+) |
| G157227 | NA | other | upstream | 1948014 | 327649 ~ 356483 (+) |
| G157108 | NA | other | upstream | 2157644 | 116156 ~ 146853 (+) |
| G158416 | NA | other | downstream | 283406 | 2595876 ~ 2614293 (+) |
| CI01000030_03018776_03042194 | FGF22 | other | downstream | 700986 | 3018776 ~ 3043773 (+) |
| G159685 | NA | other | downstream | 2119330 | 4431800 ~ 4488526 (+) |
| G159816 | NA | other | downstream | 2204308 | 4516778 ~ 4517381 (+) |
| CI01000030_07200104_07202258 | GCGA | other | downstream | 4887465 | 7200104 ~ 7202485 (+) |
